RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TRPM2O94759 1503 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 MTMR3Q13615 1198 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 KRT81Q14533 505 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 ARHGAP24Q8N264 748 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 A0A1W2PP64 1363 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 A0A1B0GUA9 196 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 IP6K1Q92551 441 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 SERTAD1Q9UHV2 236 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 ZAP70P43403 619 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 CYP2J2P51589 502 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 ADKP55263 362 aaKnown RBP20.31■□□□□ 0.84
SHANK1-202ENST00000359082 C19orf44Q9H6X5 657 aa20.31■□□□□ 0.84
SHANK1-202ENST00000359082 CPSF2Q9P2I0 782 aaKnown RBP20.31■□□□□ 0.84
SHANK1-202ENST00000359082 SH3TC1Q8TE82 1336 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 JAK2O60674 1132 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 PTPROQ16827 1216 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 PALM2Q8IXS6 379 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 LARGE2Q8N3Y3 721 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 STK32BQ9NY57 414 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 SEPT10Q9P0V9 454 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 DIXDC1Q155Q3 683 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 CABS1Q96KC9 395 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 IFIH1Q9BYX4 1025 aaKnown RBP20.3■□□□□ 0.84
SHANK1-202ENST00000359082 HAUS2Q9NVX0 235 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 METTL13Q8N6R0 699 aa20.3■□□□□ 0.84
SHANK1-202ENST00000359082 RFC1P35251 1148 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-202ENST00000359082 PDE1CQ14123 709 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-202ENST00000359082 KRT12Q99456 494 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-202ENST00000359082 RSPH3Q86UC2 560 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 PRAG1Q86YV5 1406 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
SHANK1-202ENST00000359082 NXNQ6DKJ4 435 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 SCYL2Q6P3W7 929 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 ST7Q9NRC1 585 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 PCDHB13Q9Y5F0 798 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 ABCB4P21439 1286 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 RFX1P22670 979 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 C2CD5Q86YS7 1000 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
SHANK1-202ENST00000359082 MAP7Q14244 749 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 LPIN2Q92539 896 aa20.29■□□□□ 0.84
SHANK1-202ENST00000359082 KIAA0556O60303 1618 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 H0YIN7 160 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 YARSP54577 528 aaKnown RBP20.28■□□□□ 0.84
SHANK1-202ENST00000359082 CTAGE3PQ8IX95 158 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 CROCCP2Q86T23 111 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 AMFRQ9UKV5 643 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 LPXNO60711 386 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 P4HA1P13674 534 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 MIER3Q7Z3K6 550 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
SHANK1-202ENST00000359082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.28■□□□□ 0.84
SHANK1-202ENST00000359082 RAB20Q9NX57 234 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 CCDC13Q8IYE1 715 aa20.28■□□□□ 0.84
SHANK1-202ENST00000359082 RNF10Q8N5U6 811 aaKnown RBP20.28■□□□□ 0.84
SHANK1-202ENST00000359082 STAM2O75886 525 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 TFAP4Q01664 338 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 ITKQ08881 620 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 USP19O94966 1318 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 PHLDB2Q86SQ0 1253 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 MAIP1Q8WWC4 291 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 ARHGAP6O43182 974 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 A1BGP04217 495 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 KSR1Q8IVT5 923 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.27■□□□□ 0.84
SHANK1-202ENST00000359082 SMCO2A6NFE2 343 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 KRT71Q3SY84 523 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 CAPN12Q6ZSI9 719 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 GPBP1Q86WP2 473 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 DEPTORQ8TB45 409 aa20.27■□□□□ 0.84
SHANK1-202ENST00000359082 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
SHANK1-202ENST00000359082 BUB1O43683 1085 aa20.27■□□□□ 0.83
SHANK1-202ENST00000359082 ABL1P00519 1130 aa20.27■□□□□ 0.83
SHANK1-202ENST00000359082 RAB17Q9H0T7 212 aa20.27■□□□□ 0.83
SHANK1-202ENST00000359082 E7EWF7 191 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 STX2P32856 288 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 IFRD2Q12894 506 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ARHGEF16Q5VV41 709 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 PARP2Q9UGN5 583 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 OTUD6AQ7L8S5 288 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ATP2A3Q93084 1043 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 AOX1Q06278 1338 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 IBTKQ9P2D0 1353 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ANKRD20A3Q5VUR7 823 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ADAMTS12P58397 1594 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 ARHGAP25P42331 645 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 PPARAQ07869 468 aa20.26■□□□□ 0.83
SHANK1-202ENST00000359082 TESPA1A2RU30 521 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
SHANK1-202ENST00000359082 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 GAS7O60861 476 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 KCNJ12Q14500 433 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 SPDYE2Q495Y8 402 aa20.25■□□□□ 0.83
SHANK1-202ENST00000359082 CTNNA1P35221 906 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms