RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PYM1Q9BRP8 204 aaKnown RBP16.09■□□□□ 0.17
SIRPA-202ENST00000358771 IMPACTQ9P2X3 320 aa16.09■□□□□ 0.17
SIRPA-202ENST00000358771 USP27XA6NNY8 438 aa16.08■□□□□ 0.17
SIRPA-202ENST00000358771 FGFR2P21802 821 aa16.08■□□□□ 0.17
SIRPA-202ENST00000358771 GPS2Q13227 327 aa16.08■□□□□ 0.17
SIRPA-202ENST00000358771 WWC2Q6AWC2 1192 aa16.08■□□□□ 0.17
SIRPA-202ENST00000358771 PLA2G4DQ86XP0 818 aa16.08■□□□□ 0.17
SIRPA-202ENST00000358771 DHX40Q8IX18 779 aaKnown RBP16.08■□□□□ 0.17
SIRPA-202ENST00000358771 BCL9O00512 1426 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 CCDC175P0C221 793 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 PDE4DQ08499 809 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 TXNRD3Q86VQ6 643 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 SEPT12Q8IYM1 358 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 MED1Q15648 1581 aaPredicted RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 DDAH1O94760 285 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 NAA30Q147X3 362 aaPredicted RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 SPECC1LQ69YQ0 1117 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
SIRPA-202ENST00000358771 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
SIRPA-202ENST00000358771 MROH7-TTC4A0A0A0MT08 1334 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 TERF1P54274 439 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 PTPREP23469 700 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 TECP42680 631 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
SIRPA-202ENST00000358771 ILDR1Q86SU0 546 aaPredicted RBP16.07■□□□□ 0.16
SIRPA-202ENST00000358771 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
SIRPA-202ENST00000358771 SEMA3EO15041 775 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 SPAG1Q07617 926 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 PAK1Q13153 545 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 CCDC40Q4G0X9 1142 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 RESP18Q5W5W9 173 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 VGLL2Q8N8G2 317 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 GUCA1BQ9UMX6 200 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 WDR19Q8NEZ3 1342 aa16.07■□□□□ 0.16
SIRPA-202ENST00000358771 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 ERICH4A6NGS2 130 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 TNNT3P45378 269 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 GRAPQ13588 217 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 ZNF569Q5MCW4 686 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 TCERG1LQ5VWI1 586 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 KRT79Q5XKE5 535 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 QTRT2Q9H974 415 aaKnown RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 HSP90B2PQ58FF3 399 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 NELFBQ8WX92 580 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 CARD6Q9BX69 1037 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 SRPRBQ9Y5M8 271 aaKnown RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 PNPLA7Q6ZV29 1317 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-202ENST00000358771 LEMD3Q9Y2U8 911 aa16.06■□□□□ 0.16
SIRPA-202ENST00000358771 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
SIRPA-202ENST00000358771 SPA17Q15506 151 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
SIRPA-202ENST00000358771 VEZTQ9HBM0 779 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 ZYXQ15942 572 aaKnown RBP16.05■□□□□ 0.16
SIRPA-202ENST00000358771 STAG2Q8N3U4 1231 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 APBA3O96018 575 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 KRT9P35527 623 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 ARID5AQ03989 594 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
SIRPA-202ENST00000358771 CSGALNACT2Q8N6G5 542 aa16.05■□□□□ 0.16
SIRPA-202ENST00000358771 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.05■□□□□ 0.16
SIRPA-202ENST00000358771 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
SIRPA-202ENST00000358771 DPF2Q92785 391 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 DBNDD1Q9H9R9 158 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 TCRBV5S4A2TA0A5A2 114 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 CACNB3P54284 484 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 ERCC6LQ2NKX8 1250 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 SLC16A2P36021 539 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 FAM193AP78312 1265 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 CABP7Q86V35 215 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 FCHSD1Q86WN1 690 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 TSG101Q99816 390 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 LRWD1Q9UFC0 647 aa16.04■□□□□ 0.16
SIRPA-202ENST00000358771 GOLGA6L9A6NEM1 432 aa16.03■□□□□ 0.16
SIRPA-202ENST00000358771 AKR1B10O60218 316 aa16.03■□□□□ 0.16
SIRPA-202ENST00000358771 USH1GQ495M9 461 aa16.03■□□□□ 0.16
SIRPA-202ENST00000358771 COA7Q96BR5 231 aa16.03■□□□□ 0.16
SIRPA-202ENST00000358771 FEZ1Q99689 392 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms