RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 INTS8Q75QN2 995 aaKnown RBP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 PPFIBP2Q8ND30 876 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 ABCA6Q8N139 1617 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 DDAH1O94760 285 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
COL9A1-202ENST00000357250 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 PHKBQ93100 1093 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 PLCB1Q9NQ66 1216 aa13.04□□□□□ -0.32
COL9A1-202ENST00000357250 GOLGA6CA6NDK9 693 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 CYP27B1O15528 508 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 GOLGA6DP0CG33 693 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 DNM2P50570 870 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 GTF2A1P52655 376 aaPredicted RBP13.03□□□□□ -0.32
COL9A1-202ENST00000357250 RPS8P62241 208 aaKnown RBP13.03□□□□□ -0.32
COL9A1-202ENST00000357250 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 PICK1Q9NRD5 415 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 GOLGA6AQ9NYA3 693 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 H7C1D1 291 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 KRT5P13647 590 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 TFAP4Q01664 338 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 BRDTQ58F21 947 aaPredicted RBP13.03□□□□□ -0.32
COL9A1-202ENST00000357250 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
COL9A1-202ENST00000357250 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 FAM204AQ9H8W3 233 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
COL9A1-202ENST00000357250 PFKFB1P16118 471 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 BRINP3Q76B58 766 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 RASSF4Q9H2L5 321 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 USP21Q9UK80 565 aa13.03□□□□□ -0.32
COL9A1-202ENST00000357250 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 NDUFAB1O14561 156 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 SEMA3EO15041 775 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 ALDH1B1P30837 517 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 TRPC3Q13507 836 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 UTP14CQ5TAP6 766 aaKnown RBP13.02□□□□□ -0.32
COL9A1-202ENST00000357250 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.32
COL9A1-202ENST00000357250 MAP4K1Q92918 833 aa13.02□□□□□ -0.32
COL9A1-202ENST00000357250 GOLGA6BA6NDN3 693 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 CCDC169A6NNP5 214 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 ZBED4O75132 1171 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 FANCBQ8NB91 859 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 XPO4Q9C0E2 1151 aaKnown RBP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 RAB17Q9H0T7 212 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 ZBTB21Q9ULJ3 1066 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 STK10O94804 968 aaKnown RBP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 YWHAEP62258 255 aaKnown RBP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 LGSNQ5TDP6 509 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 PAXIP1Q6ZW49 1069 aaPredicted RBP13.02□□□□□ -0.33
COL9A1-202ENST00000357250 ZNF354CQ86Y25 554 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 IFNL3Q8IZI9 196 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 CUEDC2Q9H467 287 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
COL9A1-202ENST00000357250 EXOC3O60645 756 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 PDE6AP16499 860 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 DNAJC21Q5F1R6 531 aaKnown RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 IPO4Q8TEX9 1081 aaKnown RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 HAUS4Q9H6D7 363 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 CTTNBP2NLQ9P2B4 639 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 TRIM37O94972 964 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 MTX1Q13505 466 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 CFAP157Q5JU67 520 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 GREM2Q9H772 168 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 DBNLQ9UJU6 430 aaKnown RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 H0YCG3 227 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 ADORA1P30542 326 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 LAD1O00515 517 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 RRAGDQ9NQL2 400 aaPredicted RBP13.01□□□□□ -0.33
COL9A1-202ENST00000357250 FAM184BQ9ULE4 1060 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
COL9A1-202ENST00000357250 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms