RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 EPB41L4AQ9HCS5 686 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 PRDM11Q9NQV5 511 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 ABCF2Q9UG63 623 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 A0A087X0B3 334 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TRIM75PA6NK02 468 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 UBAP1LF5GYI3 381 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 EIF3JO75822 258 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 IFNAR1P17181 557 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 VSNL1P62760 191 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 HLFQ16534 295 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 AKNAD1Q5T1N1 836 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 LRRC31Q6UY01 552 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TICAM2Q86XR7 235 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 SYMPKQ92797 1274 aaKnown RBP9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CAPZA3Q96KX2 299 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 ANKZF1Q9H8Y5 726 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 TFR2Q9UP52 801 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 CEP131Q9UPN4 1083 aa9.29□□□□□ -0.92
CDC42SE1-201ENST00000357235 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 SMIM22K7EJ46 135 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 ACTN4O43707 911 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 MYO1BO43795 1136 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 ZMYND10O75800 440 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 PIP4K2BP78356 416 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 MAP3K12Q12852 859 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 BRD3Q15059 726 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 RRAGBQ5VZM2 374 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 TTLL11Q8NHH1 800 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 LRP2BPQ9P2M1 347 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 TRIM10Q9UDY6 481 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 KAT6BQ8WYB5 2073 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 IRS4O14654 1257 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 MFAP3LO75121 409 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 NEBLO76041 1014 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 DEXIO95424 95 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 LIG3P49916 1009 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 UBE3CQ15386 1083 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 SPATA1Q5VX52 437 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 NOA1Q8NC60 698 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 SDR42E1Q8WUS8 393 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 NACAP1Q9BZK3 213 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 GNL3LQ9NVN8 582 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 SRPRBQ9Y5M8 271 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 MYH15Q9Y2K3 1946 aa9.28□□□□□ -0.92
CDC42SE1-201ENST00000357235 PDE8BO95263 885 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 GYPCP04921 128 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 KRT9P35527 623 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 SLC4A8Q2Y0W8 1093 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 SGMS1Q86VZ5 419 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 GPIHBP1Q8IV16 184 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 LCORLQ8N3X6 602 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 CRACR2BQ8N4Y2 399 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 FANCBQ8NB91 859 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 MIEF2Q96C03 454 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 PAGE5Q96GU1 130 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 PANX2Q96RD6 677 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 NAPGQ99747 312 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 ISCA1Q9BUE6 129 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 ASAP1Q9ULH1 1129 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 TACC3Q9Y6A5 838 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 FAM237AA0A1B0GTK4 181 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 MAP2K7O14733 419 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 XBP1P17861 261 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 LIFRP42702 1097 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 SARSP49591 514 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 CNGA4Q8IV77 575 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 ZNF654Q8IZM8 581 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 KAT2BQ92831 832 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 KRT23Q9C075 422 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 HDAC6Q9UBN7 1215 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 ADD3Q9UEY8 706 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 MTMR7Q9Y216 660 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 WDR19Q8NEZ3 1342 aa9.27□□□□□ -0.93
CDC42SE1-201ENST00000357235 C21orf2O43822 256 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 SRGAP2O75044 1071 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 PCCAP05165 728 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 ERCC5P28715 1186 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CASP8Q14790 479 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 C11orf91Q3C1V1 193 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 STAG1Q8WVM7 1258 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 RABEP2Q9H5N1 569 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 KLHL33A6NCF5 533 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 WNT7AO00755 349 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 MCM7P33993 719 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 CTSWP56202 376 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 UBXN1Q04323 297 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 RASGRF1Q13972 1273 aa9.26□□□□□ -0.93
CDC42SE1-201ENST00000357235 NEDD9Q14511 834 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms