RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TLDC2A0PJX2 215 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CFBP00751 764 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ATP11AP98196 1134 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 FAM160A1Q05DH4 1040 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 KCTD2Q14681 263 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TTC38Q5R3I4 469 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 FAM102BQ5T8I3 360 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CDC37L1Q7L3B6 337 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 SPATA5Q8NB90 893 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CARD14Q9BXL6 1004 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 LZTFL1Q9NQ48 299 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TMEM63CQ9P1W3 806 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TSKSQ9UJT2 592 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TPCN1Q9ULQ1 816 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 SBNO1A3KN83 1393 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ARHGAP24Q8N264 748 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 GOLGA5Q8TBA6 731 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 KIF2CQ99661 725 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 METTL22Q9BUU2 404 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 BCL2L12Q9HB09 334 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CAPN9O14815 690 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ATP8B1O43520 1251 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 GCNT3O95395 438 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 RXRAP19793 462 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 OSBPP22059 807 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TMOD1P28289 359 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 PAK1Q13153 545 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 C8orf74Q6P047 294 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CEP120Q8N960 986 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TTF2Q9UNY4 1162 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TNNI1P19237 187 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TXKP42681 527 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 HSPA2P54652 639 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 SDCCAG8Q86SQ7 713 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 PLEKHM2Q8IWE5 1019 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 P3H4Q92791 437 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 XAGE2Q96GT9 111 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 NUP58Q9BVL2 599 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 KIF9Q9HAQ2 790 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 RAB20Q9NX57 234 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 BCAP29Q9UHQ4 241 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MYL5Q02045 173 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TYRO3Q06418 890 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ABI1Q8IZP0 508 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 FNBP4Q8N3X1 1017 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 SLC17A8Q8NDX2 589 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ANKFY1Q9P2R3 1169 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ASIC3Q9UHC3 531 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 RGS12O14924 1447 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 GCP02774 474 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 PTPREP23469 700 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 GBP1P32455 592 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 DNM1Q05193 864 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ITKQ08881 620 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TCP10Q12799 353 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TUBB2AQ13885 445 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 HHATQ5VTY9 493 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ANKRD7Q92527 254 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 LPIN2Q92539 896 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MCUR1Q96AQ8 359 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TUBB2BQ9BVA1 445 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 BABAM1Q9NWV8 329 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 GNA14O95837 355 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 POLR2BP30876 1174 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 PPP2R5CQ13362 524 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 C2CD5Q86YS7 1000 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 REXO1Q8N1G1 1221 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 POLR2MP0CAP2 368 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MTMR3Q13615 1198 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TNNI3KQ59H18 835 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MAPKAPK5Q8IW41 473 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 PSPC1Q8WXF1 523 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 CCDC68Q9H2F9 335 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MRPL11Q9Y3B7 192 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 FPGT-TNNI3KV9GXZ4 949 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 TESPA1A2RU30 521 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ABCA8O94911 1581 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 KDRP35968 1356 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 MCM6Q14566 821 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 SAMD9LQ8IVG5 1584 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 CSGALNACT2Q8N6G5 542 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ERO1AQ96HE7 468 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 PLCB1Q9NQ66 1216 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ABL1P00519 1130 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 LIG4P49917 911 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 USP14P54578 494 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 RSRC1Q96IZ7 334 aaKnown RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 ZFP91Q96JP5 570 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-202ENST00000356435 WDR17Q8IZU2 1322 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 HOXB7P09629 217 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 SRGAP2BP0DMP2 458 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 NCAPG2Q86XI2 1143 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 RPS6KC1Q96S38 1066 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 CCPG1Q9ULG6 757 aa6.11□□□□□ -1.43
PTPRD-202ENST00000356435 EBAG9O00559 213 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms