RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CSRNP2Q9H175 543 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 CAPN7Q9Y6W3 813 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 NEBLO76041 1014 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 UBXN1Q04323 297 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 TCERG1LQ5VWI1 586 aa15.78■□□□□ 0.12
SREBF1-202ENST00000355815 PAIP2Q9BPZ3 127 aaKnown RBP15.78■□□□□ 0.12
SREBF1-202ENST00000355815 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-202ENST00000355815 CLCN6P51797 869 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 CKAP4Q07065 602 aaKnown RBP15.77■□□□□ 0.12
SREBF1-202ENST00000355815 CFAP58Q5T655 872 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 MB21D2Q8IYB1 491 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-202ENST00000355815 IQUBQ8NA54 791 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 SMARCC2Q8TAQ2 1214 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 MMRN2Q9H8L6 949 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 AKR1B15C9JRZ8 316 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-202ENST00000355815 SELENOSQ9BQE4 189 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 RIPOR2Q9Y4F9 1068 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 RICTORQ6R327 1708 aa15.77■□□□□ 0.12
SREBF1-202ENST00000355815 TNNI2P48788 182 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 ATP1A2P50993 1020 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.11
SREBF1-202ENST00000355815 RAD51AP2Q09MP3 1159 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 KIF5AQ12840 1032 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 MRFAP1L1Q96HT8 127 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 GPCPD1Q9NPB8 672 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 SAMSN1Q9NSI8 373 aaKnown RBP15.77■□□□□ 0.11
SREBF1-202ENST00000355815 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 IFT172Q9UG01 1749 aa15.77■□□□□ 0.11
SREBF1-202ENST00000355815 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.11
SREBF1-202ENST00000355815 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.113e-7■■■□□ 15.8
SREBF1-202ENST00000355815 TUBB4AP04350 444 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 ANTXR2P58335 489 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 PTGDRQ13258 359 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 SLF1Q9BQI6 1058 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 CYP2D6P10635 497 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 CYLC1P35663 651 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 CCT5P48643 541 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 DIXDC1Q155Q3 683 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 TSGA10IPQ3SY00 556 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 SPECC1LQ69YQ0 1117 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 DTHD1Q6ZMT9 781 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 FMR1NBQ8N0W7 255 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 TMEM232C9JQI7 657 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 ZMYND10O75800 440 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 ZRSR2Q15696 482 aaKnown RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 BCAS4Q8TDM0 211 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 FBF1Q8TES7 1133 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 DYNLL2Q96FJ2 89 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 BMP2KQ9NSY1 1161 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-202ENST00000355815 JRKLQ9Y4A0 524 aa15.76■□□□□ 0.11
SREBF1-202ENST00000355815 NCAPD2Q15021 1401 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 ZNF76P36508 570 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 CCDC42Q96M95 316 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 TACO1Q9BSH4 297 aaKnown RBP15.75■□□□□ 0.11
SREBF1-202ENST00000355815 LMTK3Q96Q04 1460 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 MYO1CO00159 1063 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 KRT86O43790 486 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 UFL1O94874 794 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 LDHCP07864 332 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 BAIAP2L1Q9UHR4 511 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 UTYO14607 1347 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 TXKP42681 527 aa15.75■□□□□ 0.11
SREBF1-202ENST00000355815 SARNPP82979 210 aaKnown RBP15.75■□□□□ 0.11
SREBF1-202ENST00000355815 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
SREBF1-202ENST00000355815 A0A1W2PQ27 194 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 A0A1W2PQ64 194 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 A0A1W2PQD8 194 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 WTIPA6NIX2 430 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-202ENST00000355815 USP17L8P0C7I0 530 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 VAV2P52735 878 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 TEX11Q8IYF3 940 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 MEGF6O75095 1541 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 A0A1B0GUA9 196 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 PRDX5P30044 214 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 SYMPKQ92797 1274 aaKnown RBP15.74■□□□□ 0.11
SREBF1-202ENST00000355815 NAPGQ99747 312 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-202ENST00000355815 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 TACC1O75410 805 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 INF2Q27J81 1249 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 CCDC40Q4G0X9 1142 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 CELF1Q92879 486 aaKnown RBP15.74■□□□□ 0.11
SREBF1-202ENST00000355815 ZNF287Q9HBT7 754 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 FAN1Q9Y2M0 1017 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 GOLGA6BA6NDN3 693 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 CCDC6Q16204 474 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 KMT5BQ4FZB7 885 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 DYMQ7RTS9 669 aa15.74■□□□□ 0.11
SREBF1-202ENST00000355815 PNMA6AP0CW24 399 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-202ENST00000355815 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
SREBF1-202ENST00000355815 LUC7L2Q9Y383 392 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms