RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MKL1Q969V6 931 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 RBSNQ9H1K0 784 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 PI4KBQ9UBF8 816 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 V9GY48 417 aaPredicted RBP19.86■□□□□ 0.77
VPS13B-201ENST00000355155 GOLGA6L4A6NEF3 574 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 TOB1P50616 345 aaPredicted RBP19.86■□□□□ 0.77
VPS13B-201ENST00000355155 SLC35G1Q2M3R5 365 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 UVSSAQ2YD98 709 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 SH3BP5LQ7L8J4 393 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 ELOA2Q8IYF1 753 aaPredicted RBP19.86■□□□□ 0.77
VPS13B-201ENST00000355155 NUP62CLQ9H1M0 184 aa19.86■□□□□ 0.77
VPS13B-201ENST00000355155 CMA1P23946 247 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 KRT2P35908 639 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 FAM160A1Q05DH4 1040 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 CFAP100Q494V2 611 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
VPS13B-201ENST00000355155 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 BTBD18B2RXH4 712 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 hCG_1984214I3L0E3 225 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 M0R2N6 131 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 ZNF713Q8N859 430 aaPredicted RBP19.85■□□□□ 0.77
VPS13B-201ENST00000355155 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
VPS13B-201ENST00000355155 SPDYE2BA6NHP3 402 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 SPDYE6P0CI01 402 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 PICALMQ13492 652 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 STK38Q15208 465 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 CCAR1Q8IX12 1150 aaKnown RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 FMR1NBQ8N0W7 255 aaPredicted RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 CMTR1Q8N1G2 835 aaKnown RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 DACT1Q9NYF0 836 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 ZNF219Q9P2Y4 722 aaPredicted RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 HPSEQ9Y251 543 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 AKR1B1P15121 316 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 TRAPPC10P48553 1259 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 ASPRV1Q53RT3 343 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 ZNF579Q8NAF0 562 aaKnown RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 MRPS27Q92552 414 aaKnown RBP19.84■□□□□ 0.77
VPS13B-201ENST00000355155 GOLPH3LQ9H4A5 285 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 RIOX1Q9H6W3 641 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 PSMD14O00487 310 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 NR1I2O75469 434 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 CALML3P27482 149 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 PTGER2P43116 358 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 LARGE2Q8N3Y3 721 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 HDAC9Q9UKV0 1011 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 KCNJ14Q9UNX9 436 aa19.84■□□□□ 0.77
VPS13B-201ENST00000355155 CYTH3O43739 400 aa19.83■□□□□ 0.77
VPS13B-201ENST00000355155 CUTAO60888 179 aa19.83■□□□□ 0.77
VPS13B-201ENST00000355155 TTLL1O95922 423 aa19.83■□□□□ 0.77
VPS13B-201ENST00000355155 SF3A1Q15459 793 aaKnown RBP19.83■□□□□ 0.77
VPS13B-201ENST00000355155 PPP1R9BQ96SB3 815 aa19.83■□□□□ 0.77
VPS13B-201ENST00000355155 BMP15O95972 392 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 MAP3K11Q16584 847 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 ZFPM1Q8IX07 1006 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 NIM1KQ8IY84 436 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 STAG2Q8N3U4 1231 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 NYAP2Q9P242 653 aa19.83■□□□□ 0.76
VPS13B-201ENST00000355155 DICER1Q9UPY3 1922 aaKnown RBP19.83■□□□□ 0.76
VPS13B-201ENST00000355155 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 BICD2Q8TD16 824 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 BRMS1Q9HCU9 246 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 PCDHAC2Q9Y5I4 1007 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 SLC4A8Q2Y0W8 1093 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 ZNF277Q9NRM2 450 aaPredicted RBP19.82■□□□□ 0.76
VPS13B-201ENST00000355155 VPS54Q9P1Q0 977 aa19.82■□□□□ 0.76
VPS13B-201ENST00000355155 ESYT2A0FGR8 921 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 DDTLA6NHG4 134 aaPredicted RBP19.81■□□□□ 0.76
VPS13B-201ENST00000355155 PARP1P09874 1014 aaKnown RBP19.81■□□□□ 0.76
VPS13B-201ENST00000355155 PDHBP11177 359 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 MAP3K10Q02779 954 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 UPF1Q92900 1129 aaKnown RBP eCLIP19.81■□□□□ 0.76
VPS13B-201ENST00000355155 PRMT6Q96LA8 375 aaPredicted RBP19.81■□□□□ 0.76
VPS13B-201ENST00000355155 BARHL2Q9NY43 387 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 CEP131Q9UPN4 1083 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 TBC1D12O60347 775 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 ME1P48163 572 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 MTMR8Q96EF0 704 aa19.81■□□□□ 0.76
VPS13B-201ENST00000355155 HERC5Q9UII4 1024 aaKnown RBP19.81■□□□□ 0.76
VPS13B-201ENST00000355155 RPS12P25398 132 aaKnown RBP19.8■□□□□ 0.76
VPS13B-201ENST00000355155 RESP18Q5W5W9 173 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 CCDC73Q6ZRK6 1079 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 FAM83AQ86UY5 434 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 OXER1Q8TDS5 423 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 PGAP2Q9UHJ9 254 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 STX8Q9UNK0 236 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 CNTNAP1P78357 1384 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 NFKBIEO00221 500 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 CAVIN2O95810 425 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 PTPREP23469 700 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 ZNF280AP59817 542 aaPredicted RBP19.8■□□□□ 0.76
VPS13B-201ENST00000355155 GNL2Q13823 731 aaKnown RBP19.8■□□□□ 0.76
VPS13B-201ENST00000355155 CCDC148Q8NFR7 591 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 FAM151AQ8WW52 585 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 TAOK3Q9H2K8 898 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 STXBP3O00186 592 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 TNMDQ9H2S6 317 aa19.8■□□□□ 0.76
VPS13B-201ENST00000355155 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
VPS13B-201ENST00000355155 CEBPZQ03701 1054 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms