RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 IGSF22Q8N9C0 903 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 RASGRP4Q8TDF6 673 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 RBM28Q9NW13 759 aaKnown RBP22.23■■□□□ 1.15
COL13A1-201ENST00000354547 STX10O60499 249 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 NPY5RQ15761 445 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 GPKOWQ92917 476 aaPredicted RBP eCLIP22.23■■□□□ 1.15
COL13A1-201ENST00000354547 NHSL1Q5SYE7 1610 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 CICQ96RK0 1608 aaPredicted RBP22.23■■□□□ 1.15
COL13A1-201ENST00000354547 PPP2R5BQ15173 497 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 PTF1AQ7RTS3 328 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 TXNRD3Q86VQ6 643 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 PPFIBP1Q86W92 1011 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 MCM9Q9NXL9 1143 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
COL13A1-201ENST00000354547 USP17L8P0C7I0 530 aa22.22■■□□□ 1.15
COL13A1-201ENST00000354547 SPATA20Q8TB22 786 aa22.22■■□□□ 1.15
COL13A1-201ENST00000354547 AKR1B15C9JRZ8 316 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-201ENST00000354547 ERCC5P28715 1186 aaPredicted RBP22.22■■□□□ 1.15
COL13A1-201ENST00000354547 DPYDQ12882 1025 aa22.22■■□□□ 1.15
COL13A1-201ENST00000354547 SPATA1Q5VX52 437 aa22.22■■□□□ 1.15
COL13A1-201ENST00000354547 CRNKL1Q9BZJ0 848 aaKnown RBP22.22■■□□□ 1.15
COL13A1-201ENST00000354547 MRPL44Q9H9J2 332 aaKnown RBP22.22■■□□□ 1.15
COL13A1-201ENST00000354547 CNTNAP5Q8WYK1 1306 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 BCL9LQ86UU0 1499 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 KDM4FA0A1W2PPD8 638 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 HIBADHP31937 336 aaKnown RBP22.21■■□□□ 1.15
COL13A1-201ENST00000354547 RPS8P62241 208 aaKnown RBP22.21■■□□□ 1.15
COL13A1-201ENST00000354547 UTP14CQ5TAP6 766 aaKnown RBP22.21■■□□□ 1.15
COL13A1-201ENST00000354547 RRAGBQ5VZM2 374 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 FERMT2Q96AC1 680 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 ZBTB9Q96C00 473 aa22.21■■□□□ 1.15
COL13A1-201ENST00000354547 A0A1B0GTH6 734 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 CALM1P0DP23 149 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 CALM2P0DP24 149 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 CALM3P0DP25 149 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 SF3B3Q15393 1217 aaKnown RBP22.2■■□□□ 1.15
COL13A1-201ENST00000354547 TEX35Q5T0J7 233 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 PLIN2Q99541 437 aa22.2■■□□□ 1.15
COL13A1-201ENST00000354547 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
COL13A1-201ENST00000354547 SEC31AO94979 1220 aaKnown RBP22.2■■□□□ 1.14
COL13A1-201ENST00000354547 SCG2P13521 617 aa22.2■■□□□ 1.14
COL13A1-201ENST00000354547 CUL4BQ13620 913 aa22.2■■□□□ 1.14
COL13A1-201ENST00000354547 CCDC12Q8WUD4 166 aaPredicted RBP22.2■■□□□ 1.14
COL13A1-201ENST00000354547 DYNLL2Q96FJ2 89 aa22.2■■□□□ 1.14
COL13A1-201ENST00000354547 VPS16Q9H269 839 aa22.2■■□□□ 1.14
COL13A1-201ENST00000354547 TUBB4AP04350 444 aa22.2■■□□□ 1.14
COL13A1-201ENST00000354547 H2AFXP16104 143 aaPredicted RBP22.2■■□□□ 1.14
COL13A1-201ENST00000354547 PPP1R3GB7ZBB8 358 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 IL17AQ16552 155 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 FCHSD1Q86WN1 690 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
COL13A1-201ENST00000354547 RASSF8Q8NHQ8 419 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 CASP14P31944 242 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 FBXO33Q7Z6M2 555 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 TNFRSF25Q93038 417 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 CDCA7Q9BWT1 371 aaPredicted RBP22.19■■□□□ 1.14
COL13A1-201ENST00000354547 XDHP47989 1333 aa22.19■■□□□ 1.14
COL13A1-201ENST00000354547 DDAH1O94760 285 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 FAM98CQ17RN3 349 aaKnown RBP22.18■■□□□ 1.14
COL13A1-201ENST00000354547 RAD9BQ6WBX8 426 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 APTXQ7Z2E3 356 aaKnown RBP22.18■■□□□ 1.14
COL13A1-201ENST00000354547 SH3RF1Q7Z6J0 888 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 MYH13Q9UKX3 1938 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 TADA3O75528 432 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 DZIP1Q86YF9 867 aaKnown RBP22.18■■□□□ 1.14
COL13A1-201ENST00000354547 STAG2Q8N3U4 1231 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 NLRP3Q96P20 1036 aa22.18■■□□□ 1.14
COL13A1-201ENST00000354547 ATP2C1P98194 919 aaPredicted RBP22.17■■□□□ 1.14
COL13A1-201ENST00000354547 TFAP4Q01664 338 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 CLEC4GQ6UXB4 293 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 IQUBQ8NA54 791 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 GSDMAQ96QA5 445 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 PES1O00541 588 aaKnown RBP22.17■■□□□ 1.14
COL13A1-201ENST00000354547 FILIP1LQ4L180 1135 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 ADD3Q9UEY8 706 aaKnown RBP22.17■■□□□ 1.14
COL13A1-201ENST00000354547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.17■■□□□ 1.14
COL13A1-201ENST00000354547 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 DUOX1Q9NRD9 1551 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 N4BP3O15049 544 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 SETDB2Q96T68 719 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 MTRQ99707 1265 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 KAT14Q9H8E8 782 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 TAB2Q9NYJ8 693 aa22.17■■□□□ 1.14
COL13A1-201ENST00000354547 CCDC175P0C221 793 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 PPP2R3AQ06190 1150 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 FAM182BQ5T319 152 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 TMCO3Q6UWJ1 677 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 PP2D1A8MPX8 630 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 USP5P45974 858 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 BMS1Q14692 1282 aaKnown RBP22.16■■□□□ 1.14
COL13A1-201ENST00000354547 SMARCC1Q92922 1105 aaPredicted RBP22.16■■□□□ 1.14
COL13A1-201ENST00000354547 GPR101Q96P66 508 aaPredicted RBP22.16■■□□□ 1.14
COL13A1-201ENST00000354547 GDAQ9Y2T3 454 aa22.16■■□□□ 1.14
COL13A1-201ENST00000354547 USP17L3A6NCW0 530 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 USP17L4A6NCW7 530 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 BMP15O95972 392 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 FXR1P51114 621 aaKnown RBP eCLIP22.15■■□□□ 1.14
COL13A1-201ENST00000354547 USP17L1Q7RTZ2 530 aa22.15■■□□□ 1.14
COL13A1-201ENST00000354547 EEF2KMTQ96G04 330 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms