RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 APPP05067 770 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 MX1P20591 662 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 TDO2P48775 406 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 CDK8P49336 464 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 CCNA1P78396 465 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 CATSPERGQ6ZRH7 1159 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-202ENST00000354433 DEFB118Q96PH6 123 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 PORCNQ9H237 461 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 STAP2Q9UGK3 403 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 A0A1W2PRG0 241 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 RAD21O60216 631 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 PDE1AP54750 535 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 Q3C1V9 767 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-202ENST00000354433 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 GPR142Q7Z601 462 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 STRBPQ96SI9 672 aaKnown RBP13.74□□□□□ -0.21
CDRT1-202ENST00000354433 RABGAP1Q9Y3P9 1069 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 MYH7P12883 1935 aa13.74□□□□□ -0.21
CDRT1-202ENST00000354433 CDC45O75419 566 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-202ENST00000354433 SEC24BO95487 1268 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
CDRT1-202ENST00000354433 PLEKHH3Q7Z736 793 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 PI4K2BQ8TCG2 481 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDRT1-202ENST00000354433 GJD2Q9UKL4 321 aa13.73□□□□□ -0.21
CDRT1-202ENST00000354433 SPDYE16A6NNV3 312 aaPredicted RBP13.72□□□□□ -0.21
CDRT1-202ENST00000354433 M0R2C6 588 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 SGPL1O95470 568 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
CDRT1-202ENST00000354433 ZKSCAN1P17029 563 aaPredicted RBP13.72□□□□□ -0.21
CDRT1-202ENST00000354433 GNAT2P19087 354 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 RGS2P41220 211 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 TRIB2Q92519 343 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 LPAR1Q92633 364 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 DPF3Q92784 378 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 IVNS1ABPQ9Y6Y0 642 aa13.72□□□□□ -0.21
CDRT1-202ENST00000354433 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
CDRT1-202ENST00000354433 GSG1L2A8MUP6 293 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 FLOT1O75955 427 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 TRIM32Q13049 653 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 APBA2Q99767 749 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 HTATIP2Q9BUP3 242 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 NACAP1Q9BZK3 213 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 HMX1Q9NP08 348 aaPredicted RBP13.71□□□□□ -0.21
CDRT1-202ENST00000354433 PAK6Q9NQU5 681 aaPredicted RBP13.71□□□□□ -0.21
CDRT1-202ENST00000354433 TMX2Q9Y320 296 aa13.71□□□□□ -0.21
CDRT1-202ENST00000354433 CNMDO75829 334 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.22
CDRT1-202ENST00000354433 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.22
CDRT1-202ENST00000354433 PLS1Q14651 629 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 COG2Q14746 738 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 LBX2Q6XYB7 198 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 SEC62Q99442 399 aaKnown RBP13.71□□□□□ -0.22
CDRT1-202ENST00000354433 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 EPB41L4AQ9HCS5 686 aaPredicted RBP13.71□□□□□ -0.22
CDRT1-202ENST00000354433 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 BTBD7Q9P203 1132 aa13.71□□□□□ -0.22
CDRT1-202ENST00000354433 MYH8P13535 1937 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 RPTORQ8N122 1335 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 WDR46O15213 610 aaKnown RBP13.7□□□□□ -0.22
CDRT1-202ENST00000354433 SBK1Q52WX2 424 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
CDRT1-202ENST00000354433 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
CDRT1-202ENST00000354433 SDSP20132 328 aa13.69□□□□□ -0.22
CDRT1-202ENST00000354433 MAP2K5Q13163 448 aa13.69□□□□□ -0.22
CDRT1-202ENST00000354433 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
CDRT1-202ENST00000354433 TRMT44Q8IYL2 757 aaKnown RBP13.69□□□□□ -0.22
CDRT1-202ENST00000354433 NAPBQ9H115 298 aa13.69□□□□□ -0.22
CDRT1-202ENST00000354433 ROBO3Q96MS0 1386 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 PRDM1O75626 825 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 CCL14Q16627 93 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 MORN1Q5T089 497 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 ATG4CQ96DT6 458 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 DOCK3Q8IZD9 2030 aa13.68□□□□□ -0.22
CDRT1-202ENST00000354433 PATL2C9JE40 543 aaKnown RBP13.67□□□□□ -0.22
CDRT1-202ENST00000354433 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
CDRT1-202ENST00000354433 RASA1P20936 1047 aa13.67□□□□□ -0.22
CDRT1-202ENST00000354433 PTPREP23469 700 aa13.67□□□□□ -0.22
CDRT1-202ENST00000354433 DSG3P32926 999 aa13.67□□□□□ -0.22
CDRT1-202ENST00000354433 NCAPG2Q86XI2 1143 aa13.67□□□□□ -0.22
CDRT1-202ENST00000354433 SIAH1Q8IUQ4 282 aa13.67□□□□□ -0.22
CDRT1-202ENST00000354433 ZNF444Q8N0Y2 327 aaPredicted RBP13.67□□□□□ -0.22
CDRT1-202ENST00000354433 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms