RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ATF7P17544 494 aaPredicted RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 PHKA1P46020 1223 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ASIC2Q16515 512 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 UTP14CQ5TAP6 766 aaKnown RBP12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ABI1Q8IZP0 508 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
SLC6A20-201ENST00000353278 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 CIAO1O76071 339 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 GALNT17Q6IS24 598 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 EAF2Q96CJ1 260 aaPredicted RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 MASTLQ96GX5 879 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 MAPK8IP1Q9UQF2 711 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 ZEB2O60315 1214 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 FAM102BQ5T8I3 360 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 BLIDQ8IZY5 108 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 MLKLQ8NB16 471 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 ROBO2Q9HCK4 1378 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 SLC10A4Q96EP9 437 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 NSRP1Q9H0G5 558 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 LIG4P49917 911 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 NELFCDQ8IXH7 590 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 TTC14Q96N46 770 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 JPH2Q9BR39 696 aaPredicted RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 VPS16Q9H269 839 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 TBC1D7Q9P0N9 293 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 PCDHA1Q9Y5I3 950 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 MYOM2P54296 1465 aa12.48□□□□□ -0.41
SLC6A20-201ENST00000353278 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 FANCBQ8NB91 859 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 ZNF830Q96NB3 372 aaPredicted RBP12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 USP6P35125 1406 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 DDAH1O94760 285 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 TM6SF1Q9BZW5 370 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 GPR108Q9NPR9 543 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 TUBB4BP68371 445 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 NUP58Q9BVL2 599 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 POLR3GO15318 223 aaPredicted RBP12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 SH3BP5O60239 455 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 POLA2Q14181 598 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 CCDC122Q5T0U0 273 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 RPS6KC1Q96S38 1066 aa12.47□□□□□ -0.41
SLC6A20-201ENST00000353278 TNNC2P02585 160 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 GRAPQ13588 217 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 CCDC25Q86WR0 208 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 GPR161Q8N6U8 529 aaKnown RBP12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 FBF1Q8TES7 1133 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 PIGBQ92521 554 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 KDM5CP41229 1560 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 XPOTO43592 962 aaKnown RBP12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 POLGP54098 1239 aaPredicted RBP12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 GABPAQ06546 454 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 TFDP1Q14186 410 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 CDC37L1Q7L3B6 337 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 C2orf69Q8N8R5 385 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 GOLGA5Q8TBA6 731 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 FAM107BQ9H098 131 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 LZTFL1Q9NQ48 299 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.41
SLC6A20-201ENST00000353278 ASPRV1Q53RT3 343 aa12.46□□□□□ -0.42
SLC6A20-201ENST00000353278 UBL4BQ8N7F7 174 aa12.46□□□□□ -0.42
SLC6A20-201ENST00000353278 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
SLC6A20-201ENST00000353278 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.42
SLC6A20-201ENST00000353278 SCG2P13521 617 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 VAV2P52735 878 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 TERF1P54274 439 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 MXRA7P84157 204 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 NLRP10Q86W26 655 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 GPBP1Q86WP2 473 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 ATP7BP35670 1465 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
SLC6A20-201ENST00000353278 GOLGA8HP0CJ92 632 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms