RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 SARSP49591 514 aaKnown RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 ETF1P62495 437 aaKnown RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 VSTM4Q8IW00 320 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 REXO1L1PQ8IX06 675 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 KRT222Q8N1A0 295 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 ZBTB9Q96C00 473 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 URI1O94763 535 aaPredicted RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
PDAP1-201ENST00000350498 IL17AQ16552 155 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 TPTE2Q6XPS3 522 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 PIK3AP1Q6ZUJ8 805 aa18.93■□□□□ 0.62
PDAP1-201ENST00000350498 TMEM139Q8IV31 216 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 TNFRSF25Q93038 417 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 SMARCE1Q969G3 411 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 CRNKL1Q9BZJ0 848 aaKnown RBP18.92■□□□□ 0.62
PDAP1-201ENST00000350498 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
PDAP1-201ENST00000350498 IRS2Q9Y4H2 1338 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 PTGDRQ13258 359 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 MORC3Q14149 939 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 CARD6Q9BX69 1037 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
PDAP1-201ENST00000350498 SAP30BPQ9UHR5 308 aaKnown RBP18.92■□□□□ 0.62
PDAP1-201ENST00000350498 TNRC6CQ9HCJ0 1690 aaKnown RBP18.91■□□□□ 0.62
PDAP1-201ENST00000350498 H2AFXP16104 143 aaPredicted RBP18.91■□□□□ 0.62
PDAP1-201ENST00000350498 TFAP4Q01664 338 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 SLC35G1Q2M3R5 365 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 DZIP1Q86YF9 867 aaKnown RBP18.91■□□□□ 0.62
PDAP1-201ENST00000350498 DESI2Q9BSY9 194 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 KIF2AO00139 706 aaPredicted RBP18.91■□□□□ 0.62
PDAP1-201ENST00000350498 SEC31AO94979 1220 aaKnown RBP18.91■□□□□ 0.62
PDAP1-201ENST00000350498 MCM7P33993 719 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 TERF2Q15554 542 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 TYW1BQ6NUM6 668 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 TOGARAM2Q6ZUX3 1019 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 WDR24Q96S15 920 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 MTA3Q9BTC8 594 aa18.91■□□□□ 0.62
PDAP1-201ENST00000350498 FAM205AQ6ZU69 1335 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 KIF20AO95235 890 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 PLCD1P51178 756 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 FAM53CQ9NYF3 392 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 A0A0U1RQJ8 604 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 DPYDQ12882 1025 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 VPS72Q15906 364 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 NYXQ9GZU5 481 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
PDAP1-201ENST00000350498 ERICH4A6NGS2 130 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 NLRP5P59047 1200 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 MTF1Q14872 753 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 TTC38Q5R3I4 469 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 CTCFLQ8NI51 663 aaPredicted RBP18.89■□□□□ 0.61
PDAP1-201ENST00000350498 TGFBRAP1Q8WUH2 860 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 PAGE5Q96GU1 130 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 IRX2Q9BZI1 471 aaPredicted RBP18.89■□□□□ 0.61
PDAP1-201ENST00000350498 LRRC4BQ9NT99 713 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 BTAF1O14981 1849 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 TEX33O43247 280 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
PDAP1-201ENST00000350498 RCAN1P53805 252 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 NT5DC1Q5TFE4 455 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 MAPKAPK5Q8IW41 473 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
PDAP1-201ENST00000350498 ORC4O43929 436 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 ZNF579Q8NAF0 562 aaKnown RBP18.88■□□□□ 0.61
PDAP1-201ENST00000350498 PPP2R2CQ9Y2T4 447 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 ZNF18P17022 549 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 XBP1P17861 261 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 USP5P45974 858 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 MTRQ99707 1265 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 ANKRD2Q9GZV1 360 aa18.88■□□□□ 0.61
PDAP1-201ENST00000350498 MKRN1Q9UHC7 482 aaKnown RBP18.88■□□□□ 0.61
PDAP1-201ENST00000350498 NRDCO43847 1150 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 SCG2P13521 617 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 RFC4P35249 363 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 GABPB1Q06547 395 aaPredicted RBP18.87■□□□□ 0.61
PDAP1-201ENST00000350498 KARSQ15046 597 aaKnown RBP18.87■□□□□ 0.61
PDAP1-201ENST00000350498 ATP8A2Q9NTI2 1148 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 RBM28Q9NW13 759 aaKnown RBP18.87■□□□□ 0.61
PDAP1-201ENST00000350498 DDAH1O94760 285 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 TC2NQ8N9U0 490 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 USP21Q9UK80 565 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 CEP131Q9UPN4 1083 aa18.87■□□□□ 0.61
PDAP1-201ENST00000350498 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 SEMA3EO15041 775 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 CBFA2T2O43439 604 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 KCNJ6P48051 423 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 RC3H1Q5TC82 1133 aaKnown RBP18.86■□□□□ 0.61
PDAP1-201ENST00000350498 C12orf60Q5U649 245 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 SPATA20Q8TB22 786 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 UBXN4Q92575 508 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 PLIN2Q99541 437 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 MAPK8IP1Q9UQF2 711 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 KIAA1551Q9HCM1 1747 aa18.86■□□□□ 0.61
PDAP1-201ENST00000350498 CYTH3O43739 400 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms