RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 NBPF3Q9H094 633 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 MORF4L1Q9UBU8 362 aa26.25■■□□□ 1.79
SNX3-202ENST00000349379 COL11A1P12107 1806 aaPredicted RBP26.24■■□□□ 1.79
SNX3-202ENST00000349379 GNRH1P01148 92 aa26.24■■□□□ 1.79
SNX3-202ENST00000349379 POTEEQ6S8J3 1075 aa26.24■■□□□ 1.79
SNX3-202ENST00000349379 ANKRD13CQ8N6S4 541 aa26.24■■□□□ 1.79
SNX3-202ENST00000349379 INCENPQ9NQS7 918 aa26.24■■□□□ 1.79
SNX3-202ENST00000349379 PTPN22Q9Y2R2 807 aa26.24■■□□□ 1.79
SNX3-202ENST00000349379 PSMC4P43686 418 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 BMP2KLQ5H9B9 411 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 GTF3C2Q8WUA4 911 aaPredicted RBP26.23■■□□□ 1.79
SNX3-202ENST00000349379 RUFY2Q8WXA3 655 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 CEP95Q96GE4 821 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 TRIM47Q96LD4 638 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 RPAP3Q9H6T3 665 aaPredicted RBP26.23■■□□□ 1.79
SNX3-202ENST00000349379 PLXNB2O15031 1838 aa26.23■■□□□ 1.79
SNX3-202ENST00000349379 TSPY3P0CV98 308 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 TSPY8P0CW00 308 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 TFAP4Q01664 338 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 FAM47AQ5JRC9 791 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 LBX2Q6XYB7 198 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 MKL1Q969V6 931 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 MTMR4Q9NYA4 1195 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 SYNPO2Q9UMS6 1093 aa26.22■■□□□ 1.79
SNX3-202ENST00000349379 PCP11498 1178 aaKnown RBP26.21■■□□□ 1.79
SNX3-202ENST00000349379 HAND2P61296 217 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 STAG1Q8WVM7 1258 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 TXNRD2Q9NNW7 524 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 RBPJLQ9UBG7 517 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 HPS5Q9UPZ3 1129 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 HTTP42858 3142 aa26.21■■□□□ 1.79
SNX3-202ENST00000349379 WDR46O15213 610 aaKnown RBP26.2■■□□□ 1.78
SNX3-202ENST00000349379 SGSM2O43147 1006 aa26.2■■□□□ 1.78
SNX3-202ENST00000349379 ATP2B2Q01814 1243 aa26.2■■□□□ 1.78
SNX3-202ENST00000349379 TBC1D10CQ8IV04 446 aa26.2■■□□□ 1.78
SNX3-202ENST00000349379 TTLL1O95922 423 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 NOVP48745 357 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 PRMT2P55345 433 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 FCGRTP55899 365 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 AKNAD1Q5T1N1 836 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 GOPCQ9HD26 462 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 IL17RBQ9NRM6 502 aa26.19■■□□□ 1.78
SNX3-202ENST00000349379 TSPY2A6NKD2 308 aa26.18■■□□□ 1.78
SNX3-202ENST00000349379 SPDYE16A6NNV3 312 aaPredicted RBP26.18■■□□□ 1.78
SNX3-202ENST00000349379 SPICE1Q8N0Z3 855 aa26.18■■□□□ 1.78
SNX3-202ENST00000349379 PPP4R2Q9NY27 417 aa26.18■■□□□ 1.78
SNX3-202ENST00000349379 SRRDQ9UH36 339 aa26.18■■□□□ 1.78
SNX3-202ENST00000349379 ZNF213O14771 459 aa26.17■■□□□ 1.78
SNX3-202ENST00000349379 PEX10O60683 326 aa26.17■■□□□ 1.78
SNX3-202ENST00000349379 CNMDO75829 334 aa26.17■■□□□ 1.78
SNX3-202ENST00000349379 FMNL1O95466 1100 aaPredicted RBP26.17■■□□□ 1.78
SNX3-202ENST00000349379 CLIP2Q9UDT6 1046 aa26.17■■□□□ 1.78
SNX3-202ENST00000349379 CTNNA3Q9UI47 895 aa26.17■■□□□ 1.78
SNX3-202ENST00000349379 RBBP6Q7Z6E9 1792 aaKnown RBP26.17■■□□□ 1.78
SNX3-202ENST00000349379 MYPNQ86TC9 1320 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 RANBP6O60518 1105 aaKnown RBP26.16■■□□□ 1.78
SNX3-202ENST00000349379 ECM2O94769 699 aaPredicted RBP26.16■■□□□ 1.78
SNX3-202ENST00000349379 HOXD10P28358 340 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 ERVK-9P63128 1117 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 ERVK-24P63145 666 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 COG2Q14746 738 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 MFSD6Q6ZSS7 791 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 GPRC5AQ8NFJ5 357 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 TANGO6Q9C0B7 1094 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 RNF41Q9H4P4 317 aaPredicted RBP26.16■■□□□ 1.78
SNX3-202ENST00000349379 RABGAP1Q9Y3P9 1069 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 PTCH2Q9Y6C5 1203 aa26.16■■□□□ 1.78
SNX3-202ENST00000349379 F5H6K3 240 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 NDUFB10O96000 172 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 NT5C2P49902 561 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 PTH1RQ03431 593 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 KLRC3Q07444 240 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 Q3C1V9 767 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 PPP4R3BQ5MIZ7 849 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 GMCL1P1Q8NEA9 526 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 NKX2-3Q8TAU0 364 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 TCP11L1Q9NUJ3 509 aa26.15■■□□□ 1.78
SNX3-202ENST00000349379 NEDD4P46934 1319 aa26.14■■□□□ 1.78
SNX3-202ENST00000349379 DSG3P32926 999 aa26.14■■□□□ 1.78
SNX3-202ENST00000349379 IMMTQ16891 758 aaKnown RBP26.14■■□□□ 1.78
SNX3-202ENST00000349379 PAGR1Q9BTK6 254 aa26.14■■□□□ 1.78
SNX3-202ENST00000349379 HOXC10Q9NYD6 342 aa26.14■■□□□ 1.78
SNX3-202ENST00000349379 TNPO2O14787 897 aaKnown RBP26.13■■□□□ 1.77
SNX3-202ENST00000349379 NMT2O60551 498 aa26.13■■□□□ 1.77
SNX3-202ENST00000349379 RRP12Q5JTH9 1297 aaKnown RBP26.13■■□□□ 1.77
SNX3-202ENST00000349379 LRRC47Q8N1G4 583 aaKnown RBP26.13■■□□□ 1.77
SNX3-202ENST00000349379 ARMC5Q96C12 935 aa26.13■■□□□ 1.77
SNX3-202ENST00000349379 TOMM22Q9NS69 142 aa26.13■■□□□ 1.77
SNX3-202ENST00000349379 BTBD7Q9P203 1132 aa26.13■■□□□ 1.77
SNX3-202ENST00000349379 ADAMTS5Q9UNA0 930 aa26.13■■□□□ 1.77
SNX3-202ENST00000349379 FLOT1O75955 427 aa26.12■■□□□ 1.77
SNX3-202ENST00000349379 PRKCZQ05513 592 aa26.12■■□□□ 1.77
SNX3-202ENST00000349379 FAM83BQ5T0W9 1011 aa26.12■■□□□ 1.77
SNX3-202ENST00000349379 GABRQQ9UN88 632 aa26.12■■□□□ 1.77
SNX3-202ENST00000349379 MB21D1Q8N884 522 aa26.11■■□□□ 1.77
SNX3-202ENST00000349379 ESYT1Q9BSJ8 1104 aa26.11■■□□□ 1.77
SNX3-202ENST00000349379 PORCNQ9H237 461 aa26.11■■□□□ 1.77
SNX3-202ENST00000349379 FBXO28Q9NVF7 368 aa26.11■■□□□ 1.77
SNX3-202ENST00000349379 ZNFX1Q9P2E3 1918 aaKnown RBP26.1■■□□□ 1.77
SNX3-202ENST00000349379 ZNF236Q9UL36 1845 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms