RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 PI16Q6UXB8 463 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 C10orf67Q8IYJ2 551 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
UBE3C-201ENST00000348165 TXNDC16Q9P2K2 825 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 STAP2Q9UGK3 403 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 PCDHB13Q9Y5F0 798 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 SCG2P13521 617 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 MTX1Q13505 466 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 MAP4K1Q92918 833 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 JAKMIP2Q96AA8 810 aa20.69■□□□□ 0.9
UBE3C-201ENST00000348165 FAM207AQ9NSI2 230 aaPredicted RBP20.69■□□□□ 0.9
UBE3C-201ENST00000348165 FAM170AA1A519 330 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 SLC8A3P57103 927 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 NT5C3AQ9H0P0 336 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 SERPINB2P05120 415 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
UBE3C-201ENST00000348165 NLRC4Q9NPP4 1024 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 PCDHA12Q9UN75 941 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 SSH2Q76I76 1423 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 ERFEQ4G0M1 354 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 NAPGQ99747 312 aaPredicted RBP20.68■□□□□ 0.9
UBE3C-201ENST00000348165 NUP58Q9BVL2 599 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 AGTPBP1Q9UPW5 1226 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 CD19P15391 556 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 TUBB4BP68371 445 aa20.68■□□□□ 0.9
UBE3C-201ENST00000348165 UTP14CQ5TAP6 766 aaKnown RBP20.68■□□□□ 0.9
UBE3C-201ENST00000348165 LSG1Q9H089 658 aaKnown RBP20.68■□□□□ 0.9
UBE3C-201ENST00000348165 ZEB2O60315 1214 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 NR1I2O75469 434 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 GPR162Q16538 588 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 ARHGAP27Q6ZUM4 889 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 XDHP47989 1333 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 CIAO1O76071 339 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 MIER3Q7Z3K6 550 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 MICALL1Q8N3F8 863 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 CHAMP1Q96JM3 812 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 KRT19P08727 400 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 ZMYM1Q5SVZ6 1142 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 PSMB7Q99436 277 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
UBE3C-201ENST00000348165 KIAA1468Q9P260 1216 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 DNM2P50570 870 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 CTTNBP2NLQ9P2B4 639 aa20.67■□□□□ 0.9
UBE3C-201ENST00000348165 CYP21A2P08686 494 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 KLHL30Q0D2K2 578 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 SLFN13Q68D06 897 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 SORBS3O60504 671 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 ADCY9O60503 1353 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 ZNF827Q17R98 1081 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 NLRP10Q86W26 655 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 GPBP1Q86WP2 473 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 TMTC1Q8IUR5 882 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 PIGBQ92521 554 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 SLF1Q9BQI6 1058 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 NSRP1Q9H0G5 558 aaKnown RBP20.66■□□□□ 0.9
UBE3C-201ENST00000348165 FAM169AQ9Y6X4 670 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
UBE3C-201ENST00000348165 VGLL3A8MV65 326 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 ZNF589Q86UQ0 364 aaPredicted RBP20.66■□□□□ 0.9
UBE3C-201ENST00000348165 CLIC6Q96NY7 704 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 KCNK9Q9NPC2 374 aa20.66■□□□□ 0.9
UBE3C-201ENST00000348165 CLRN2A0PK11 232 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 CAPN2P17655 700 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 DYNLL1P63167 89 aaKnown RBP20.65■□□□□ 0.9
UBE3C-201ENST00000348165 MXRA7P84157 204 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 ZBTB16Q05516 673 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 FBXO11Q86XK2 927 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 CCDC26Q8TAB7 109 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 UBLCP1Q8WVY7 318 aaPredicted RBP20.65■□□□□ 0.9
UBE3C-201ENST00000348165 RNF34Q969K3 372 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 GPR108Q9NPR9 543 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 VPS18Q9P253 973 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 MRPS9P82933 396 aaKnown RBP20.65■□□□□ 0.9
UBE3C-201ENST00000348165 ARHGAP44Q17R89 818 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 NEK8Q86SG6 692 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 CCDC84Q86UT8 332 aaPredicted RBP20.65■□□□□ 0.9
UBE3C-201ENST00000348165 XPO4Q9C0E2 1151 aaKnown RBP20.65■□□□□ 0.9
UBE3C-201ENST00000348165 SCRN1Q12765 414 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 C6orf163Q5TEZ5 329 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 LIN9Q5TKA1 542 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 ATP7BP35670 1465 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 LEMD3Q9Y2U8 911 aa20.65■□□□□ 0.9
UBE3C-201ENST00000348165 LRMPQ12912 555 aa20.64■□□□□ 0.9
UBE3C-201ENST00000348165 ARHGEF16Q5VV41 709 aa20.64■□□□□ 0.9
UBE3C-201ENST00000348165 NOX5Q96PH1 765 aa20.64■□□□□ 0.9
UBE3C-201ENST00000348165 AS3MTQ9HBK9 375 aa20.64■□□□□ 0.9
UBE3C-201ENST00000348165 ZNF335Q9H4Z2 1342 aaPredicted RBP20.64■□□□□ 0.9
UBE3C-201ENST00000348165 SECISBP2LQ93073 1101 aaKnown RBP20.64■□□□□ 0.89
UBE3C-201ENST00000348165 ATP2A2P16615 1042 aaKnown RBP20.64■□□□□ 0.89
UBE3C-201ENST00000348165 CDAN1Q8IWY9 1227 aa20.64■□□□□ 0.89
UBE3C-201ENST00000348165 SPICE1Q8N0Z3 855 aa20.64■□□□□ 0.89
UBE3C-201ENST00000348165 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
UBE3C-201ENST00000348165 ARHGAP6O43182 974 aa20.64■□□□□ 0.89
UBE3C-201ENST00000348165 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
UBE3C-201ENST00000348165 TNNI1P19237 187 aa20.64■□□□□ 0.89
UBE3C-201ENST00000348165 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms