RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 UBE4AQ14139 1066 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 FMR1NBQ8N0W7 255 aaPredicted RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 LARGE2Q8N3Y3 721 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 FANCBQ8NB91 859 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 SEMA3EO15041 775 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 PRPF4BQ13523 1007 aaKnown RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 DNAJC21Q5F1R6 531 aaKnown RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 KRT79Q5XKE5 535 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 B4DLN1 442 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 KCNJ18B7U540 433 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 TRIM37O94972 964 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
NUP50-201ENST00000347635 MORC3Q14149 939 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 IFT81Q8WYA0 676 aa16.5■□□□□ 0.23
NUP50-201ENST00000347635 MAP2K1Q02750 393 aaPredicted RBP16.49■□□□□ 0.23
NUP50-201ENST00000347635 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
NUP50-201ENST00000347635 SRGAP1Q7Z6B7 1085 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 MAN1B1Q9UKM7 699 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA6CA6NDK9 693 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA6DP0CG33 693 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 ATP1A3P13637 1013 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 SV2BQ7L1I2 683 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 PUS7LQ9H0K6 701 aaKnown RBP16.49■□□□□ 0.23
NUP50-201ENST00000347635 FOXP1Q9H334 677 aaPredicted RBP16.49■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA6AQ9NYA3 693 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 ARID5AQ03989 594 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 ATRIPQ8WXE1 791 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
NUP50-201ENST00000347635 SH2B2O14492 632 aaPredicted RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 TERF2Q15554 542 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 NIM1KQ8IY84 436 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 FER1L4A9Z1Z3 1794 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 SEPT7Q16181 437 aaKnown RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 LETM2Q2VYF4 491 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 RPGRIP1Q96KN7 1286 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 SAR1BQ9Y6B6 198 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 ADRA2BP18089 450 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 CALRP27797 417 aaKnown RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 CFAP58Q5T655 872 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 CSRNP2Q9H175 543 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 NAA30Q147X3 362 aaPredicted RBP16.48■□□□□ 0.23
NUP50-201ENST00000347635 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 CDC23Q9UJX2 597 aa16.48■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA6BA6NDN3 693 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 ZEB2O60315 1214 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 IBSPP21815 317 aaPredicted RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 ANKRD7Q92527 254 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 BBOX1O75936 387 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.47■□□□□ 0.23
NUP50-201ENST00000347635 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 GPHNQ9NQX3 736 aaPredicted RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 SALL3Q9BXA9 1300 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 C2CD5Q86YS7 1000 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
NUP50-201ENST00000347635 ADD2P35612 726 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 TNNC1P63316 161 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 OTUD6BQ8N6M0 293 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 OR8K1Q8NGG5 319 aa16.47■□□□□ 0.23
NUP50-201ENST00000347635 CASP14P31944 242 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 RBL2Q08999 1139 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA6L10A0A0M3HER8 536 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 NLRP10Q86W26 655 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 GOLGA5Q8TBA6 731 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 ENOX1Q8TC92 643 aaKnown RBP16.46■□□□□ 0.23
NUP50-201ENST00000347635 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 TBCAO75347 108 aaKnown RBP16.46■□□□□ 0.23
NUP50-201ENST00000347635 PDE8BO95263 885 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 PNMA6AP0CW24 399 aaPredicted RBP16.46■□□□□ 0.23
NUP50-201ENST00000347635 VPS72Q15906 364 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 LMBR1Q8WVP7 490 aa16.46■□□□□ 0.23
NUP50-201ENST00000347635 MMP1P03956 469 aa16.46■□□□□ 0.22
NUP50-201ENST00000347635 LONRF2Q1L5Z9 754 aa16.46■□□□□ 0.22
NUP50-201ENST00000347635 STXBP4Q6ZWJ1 553 aa16.46■□□□□ 0.22
NUP50-201ENST00000347635 PDE11AQ9HCR9 933 aa16.46■□□□□ 0.22
NUP50-201ENST00000347635 MORC2Q9Y6X9 1032 aaPredicted RBP16.46■□□□□ 0.22
NUP50-201ENST00000347635 TNKSO95271 1327 aa16.46■□□□□ 0.22
NUP50-201ENST00000347635 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 RESP18Q5W5W9 173 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 NEFHP12036 1026 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 GSDMAQ96QA5 445 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 XDHP47989 1333 aa16.45■□□□□ 0.22
NUP50-201ENST00000347635 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms