RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TNFRSF25Q93038 417 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 DDX4Q9NQI0 724 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 USP40Q9NVE5 1235 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 FBXO2Q9UK22 296 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 MTMR7Q9Y216 660 aa16.21■□□□□ 0.19
CDK5RAP1-202ENST00000346416 GRIN1Q05586 938 aa16.21■□□□□ 0.18
CDK5RAP1-202ENST00000346416 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TEKT1Q969V4 418 aa16.21■□□□□ 0.18
CDK5RAP1-202ENST00000346416 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZKSCAN5Q9Y2L8 839 aa16.21■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TRIM75PA6NK02 468 aa16.2■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NLRP5P59047 1200 aa16.2■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SPECC1Q5M775 1068 aa16.2■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CNKSR1Q969H4 720 aa16.2■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CEP95Q96GE4 821 aa16.2■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 APOBEC3HQ6NTF7 200 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SRPRBQ9Y5M8 271 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PALM3A6NDB9 673 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 GABPAQ06546 454 aa16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CDC42EP5Q6NZY7 148 aa16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ADAMTSL1Q8N6G6 1762 aa16.19■□□□□ 0.18
CDK5RAP1-202ENST00000346416 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CYTH3O43739 400 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 STRIP1Q5VSL9 837 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZNF579Q8NAF0 562 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 WNT7AO00755 349 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ECE2O60344 883 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 GOLGA8HP0CJ92 632 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TOP1P11387 765 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CRKP46108 304 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 DPCR1Q3MIW9 517 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 KIAA0825Q8IV33 1275 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 C7orf43Q8WVR3 580 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NAT10Q9H0A0 1025 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 FAM13BQ9NYF5 915 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SCN9AQ15858 1988 aa16.18■□□□□ 0.18
CDK5RAP1-202ENST00000346416 BECN2A8MW95 431 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 KLRF2D3W0D1 207 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 BIN1O00499 593 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CALML3P27482 149 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NOVP48745 357 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 DACT2Q5SW24 774 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 DHX40Q8IX18 779 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 LZTS2Q9BRK4 669 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 OSBPL5Q9H0X9 879 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SH3GLB2Q9NR46 395 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 MORC2Q9Y6X9 1032 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ADAMTS3O15072 1205 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TTC38Q5R3I4 469 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZDHHC15Q96MV8 337 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TRIM5Q9C035 493 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PDGFDQ9GZP0 370 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 BMP15O95972 392 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NFIAQ12857 509 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZNF174Q15697 407 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 AOC3Q16853 763 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TYW1BQ6NUM6 668 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TUBE1Q9UJT0 475 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
CDK5RAP1-202ENST00000346416 AKR1B1P15121 316 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 NLRP12P59046 1061 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PNOCQ13519 176 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 METTL16Q86W50 562 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PLA2G4DQ86XP0 818 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 BLIDQ8IZY5 108 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SPC24Q8NBT2 197 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 MRIQ9BWK5 157 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 CPVLQ9H3G5 476 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 MTMR4Q9NYA4 1195 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 MYH8P13535 1937 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 POLR2DO15514 142 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZNF75DP51815 510 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 AOPEPQ8N6M6 819 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 PCDHAC2Q9Y5I4 1007 aa16.15■□□□□ 0.18
CDK5RAP1-202ENST00000346416 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms