RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 HOXD10P28358 340 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 ZYXQ15942 572 aaKnown RBP23.64■■□□□ 1.37
CLTA-202ENST00000345519 KIAA1755Q5JYT7 1200 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 TTC22Q5TAA0 569 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 RILPL2Q969X0 211 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 RBPJLQ9UBG7 517 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 SYNPO2Q9UMS6 1093 aa23.64■■□□□ 1.37
CLTA-202ENST00000345519 HIP1O00291 1037 aa23.63■■□□□ 1.37
CLTA-202ENST00000345519 HSPD1P10809 573 aaKnown RBP23.63■■□□□ 1.37
CLTA-202ENST00000345519 IRF5Q13568 498 aa23.63■■□□□ 1.37
CLTA-202ENST00000345519 RPAP3Q9H6T3 665 aaPredicted RBP23.63■■□□□ 1.37
CLTA-202ENST00000345519 NYAP2Q9P242 653 aa23.63■■□□□ 1.37
CLTA-202ENST00000345519 FRMPD3Q5JV73 1810 aa23.63■■□□□ 1.37
CLTA-202ENST00000345519 FMNL1O95466 1100 aaPredicted RBP23.62■■□□□ 1.37
CLTA-202ENST00000345519 EEF2P13639 858 aaKnown RBP23.62■■□□□ 1.37
CLTA-202ENST00000345519 PRKCZQ05513 592 aa23.62■■□□□ 1.37
CLTA-202ENST00000345519 MKNK2Q9HBH9 465 aa23.62■■□□□ 1.37
CLTA-202ENST00000345519 RABGAP1Q9Y3P9 1069 aa23.62■■□□□ 1.37
CLTA-202ENST00000345519 PLXNA1Q9UIW2 1896 aa23.62■■□□□ 1.37
CLTA-202ENST00000345519 SPDYE16A6NNV3 312 aaPredicted RBP23.61■■□□□ 1.37
CLTA-202ENST00000345519 WDR46O15213 610 aaKnown RBP23.61■■□□□ 1.37
CLTA-202ENST00000345519 CNMDO75829 334 aa23.61■■□□□ 1.37
CLTA-202ENST00000345519 ERVK-9P63128 1117 aa23.61■■□□□ 1.37
CLTA-202ENST00000345519 ERVK-24P63145 666 aa23.61■■□□□ 1.37
CLTA-202ENST00000345519 PDE4BQ07343 736 aa23.61■■□□□ 1.37
CLTA-202ENST00000345519 MKL1Q969V6 931 aa23.61■■□□□ 1.37
CLTA-202ENST00000345519 FGAP02671 866 aa23.6■■□□□ 1.37
CLTA-202ENST00000345519 MFAP1P55081 439 aaKnown RBP23.6■■□□□ 1.37
CLTA-202ENST00000345519 SLC9C1Q4G0N8 1177 aa23.6■■□□□ 1.37
CLTA-202ENST00000345519 GPRC5AQ8NFJ5 357 aa23.6■■□□□ 1.37
CLTA-202ENST00000345519 NEDD1Q8NHV4 660 aa23.6■■□□□ 1.37
CLTA-202ENST00000345519 GABRQQ9UN88 632 aa23.6■■□□□ 1.37
CLTA-202ENST00000345519 TNPO2O14787 897 aaKnown RBP23.59■■□□□ 1.37
CLTA-202ENST00000345519 SLC3A2P08195 630 aaKnown RBP23.59■■□□□ 1.37
CLTA-202ENST00000345519 NOVP48745 357 aa23.59■■□□□ 1.37
CLTA-202ENST00000345519 PXYLP1Q8TE99 480 aa23.59■■□□□ 1.37
CLTA-202ENST00000345519 MTMR4Q9NYA4 1195 aa23.59■■□□□ 1.37
CLTA-202ENST00000345519 TACC3Q9Y6A5 838 aa23.59■■□□□ 1.37
CLTA-202ENST00000345519 ORC4O43929 436 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 PRDM1O75626 825 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 NBPF11Q86T75 865 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 ZNF444Q8N0Y2 327 aaPredicted RBP23.58■■□□□ 1.37
CLTA-202ENST00000345519 SLAIN1Q8ND83 568 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 CEP95Q96GE4 821 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 GJD2Q9UKL4 321 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 ADAMTS5Q9UNA0 930 aa23.58■■□□□ 1.37
CLTA-202ENST00000345519 FLT3LGP49771 235 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 COG2Q14746 738 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 Q3C1V9 767 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 COA7Q96BR5 231 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 GOPCQ9HD26 462 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 RAD50Q92878 1312 aa23.57■■□□□ 1.36
CLTA-202ENST00000345519 PCP11498 1178 aaKnown RBP23.56■■□□□ 1.36
CLTA-202ENST00000345519 MAPK4P31152 587 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 SOX10P56693 466 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 CWC27Q6UX04 472 aaKnown RBP23.56■■□□□ 1.36
CLTA-202ENST00000345519 RAET1EQ8TD07 263 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 NBPF3Q9H094 633 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 DIAPH3Q9NSV4 1193 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 HOXC10Q9NYD6 342 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 BTBD7Q9P203 1132 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 PDE4DIPQ5VU43 2346 aa23.56■■□□□ 1.36
CLTA-202ENST00000345519 PEX10O60683 326 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 GRK4P32298 578 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 CTDSPL2Q05D32 466 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 CENPQQ7L2Z9 268 aaPredicted RBP23.55■■□□□ 1.36
CLTA-202ENST00000345519 STK11IPQ8N1F8 1099 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 MB21D1Q8N884 522 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 GMCL1P1Q8NEA9 526 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 USP6NLQ92738 828 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 DSCC1Q9BVC3 393 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 PORCNQ9H237 461 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 IL25Q9H293 177 aa23.55■■□□□ 1.36
CLTA-202ENST00000345519 TTLL1O95922 423 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 DSG3P32926 999 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 NT5C2P49902 561 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 SPICE1Q8N0Z3 855 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 SH3TC2Q8TF17 1288 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 SOCS4Q8WXH5 440 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 TANGO6Q9C0B7 1094 aa23.54■■□□□ 1.36
CLTA-202ENST00000345519 TSPY3P0CV98 308 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 TSPY8P0CW00 308 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 TFAP4Q01664 338 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 PPP4R3BQ5MIZ7 849 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 STAG1Q8WVM7 1258 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 IL17RBQ9NRM6 502 aa23.53■■□□□ 1.36
CLTA-202ENST00000345519 F5H6K3 240 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 ECM2O94769 699 aaPredicted RBP23.52■■□□□ 1.36
CLTA-202ENST00000345519 NDUFB10O96000 172 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 XRCC5P13010 732 aaKnown RBP23.52■■□□□ 1.36
CLTA-202ENST00000345519 CCNA1P78396 465 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 KLRC3Q07444 240 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 MORN1Q5T089 497 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 GPR142Q7Z601 462 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 PAGR1Q9BTK6 254 aa23.52■■□□□ 1.36
CLTA-202ENST00000345519 POTEFA5A3E0 1075 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 ADCY3O60266 1144 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 FLOT1O75955 427 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 FAM47AQ5JRC9 791 aa23.51■■□□□ 1.35
CLTA-202ENST00000345519 SHCBP1Q8NEM2 672 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms