RNA–Protein interactions for RNA: ENST00000345125.7

CTSB-201, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-201ENST00000345125 USP49Q70CQ1 688 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 KRT27Q7Z3Y8 459 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 MAPKAPK5Q8IW41 473 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 ZNF444Q8N0Y2 327 aaPredicted RBP18.84■□□□□ 0.61
CTSB-201ENST00000345125 MAN1B1Q9UKM7 699 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 LRRC37AA6NMS7 1700 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 DYNC1I1O14576 645 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 MYO1BO43795 1136 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 TRIM37O94972 964 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 PLCG2P16885 1265 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 LTBP1Q14766 1721 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
CTSB-201ENST00000345125 DDX60LQ5H9U9 1706 aaKnown RBP18.84■□□□□ 0.61
CTSB-201ENST00000345125 TMC4Q7Z404 712 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 TBC1D22AQ8WUA7 517 aa18.84■□□□□ 0.61
CTSB-201ENST00000345125 FAM163AQ96GL9 167 aaPredicted RBP18.84■□□□□ 0.61
CTSB-201ENST00000345125 CDK5RAP2Q96SN8 1893 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 USP17L3A6NCW0 530 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 USP17L4A6NCW7 530 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 PRR29P0C7W0 189 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 RASA1P20936 1047 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 GNAQP50148 359 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 FANCCQ00597 558 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 MFSD14BQ5SR56 506 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 USP17L1Q7RTZ2 530 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 SLF2Q8IX21 1173 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 PDILTQ8N807 584 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 TRIML1Q8N9V2 468 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 SLC44A5Q8NCS7 719 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 SMARCE1Q969G3 411 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 ZNF287Q9HBT7 754 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 SH3GLB2Q9NR46 395 aa18.83■□□□□ 0.61
CTSB-201ENST00000345125 VEGFAP15692 232 aaPredicted RBP18.83■□□□□ 0.6
CTSB-201ENST00000345125 CALML3P27482 149 aa18.83■□□□□ 0.6
CTSB-201ENST00000345125 CCZ1BP86790 482 aa18.83■□□□□ 0.6
CTSB-201ENST00000345125 CCZ1P86791 482 aaPredicted RBP18.83■□□□□ 0.6
CTSB-201ENST00000345125 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.6
CTSB-201ENST00000345125 ZNF174Q15697 407 aa18.83■□□□□ 0.6
CTSB-201ENST00000345125 SAP30BPQ9UHR5 308 aaKnown RBP18.83■□□□□ 0.6
CTSB-201ENST00000345125 MAD2L2Q9UI95 211 aa18.83■□□□□ 0.6
CTSB-201ENST00000345125 GAKO14976 1311 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 SKILP12757 684 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 ATP1A3P13637 1013 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
CTSB-201ENST00000345125 MORC3Q14149 939 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 TEX11Q8IYF3 940 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 STAG2Q8N3U4 1231 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 SPATA20Q8TB22 786 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 FAM205AQ6ZU69 1335 aa18.82■□□□□ 0.6
CTSB-201ENST00000345125 BRWD3Q6RI45 1802 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 RHBDL3P58872 404 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 DHX8Q14562 1220 aaKnown RBP18.81■□□□□ 0.6
CTSB-201ENST00000345125 PIK3AP1Q6ZUJ8 805 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 C16orf86Q6ZW13 317 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 SP8Q8IXZ3 490 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 MLKLQ8NB16 471 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 SYMPKQ92797 1274 aaKnown RBP18.81■□□□□ 0.6
CTSB-201ENST00000345125 EPSTI1Q96J88 318 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 FLT1P17948 1338 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 A0A087X0B3 334 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 GTF2F1P35269 517 aaKnown RBP eCLIP18.81■□□□□ 0.6
CTSB-201ENST00000345125 PTGDRQ13258 359 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 TXNRD1Q16881 649 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 TMC6Q7Z403 805 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 GRAMD1CQ8IYS0 662 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 PROM2Q8N271 834 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 TMEM47Q9BQJ4 181 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 DACH1Q9UI36 760 aa18.81■□□□□ 0.6
CTSB-201ENST00000345125 C6orf229H3BNL8 230 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 PPEF1O14829 653 aaPredicted RBP18.8■□□□□ 0.6
CTSB-201ENST00000345125 CBFA2T2O43439 604 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 SLFN14P0C7P3 912 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 CDK8P49336 464 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 BLIDQ8IZY5 108 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 CCDC150Q8NCX0 1101 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 DHX58Q96C10 678 aa18.8■□□□□ 0.6
CTSB-201ENST00000345125 SH3RF1Q7Z6J0 888 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 PCDHA4Q9UN74 947 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 PALM3A6NDB9 673 aaPredicted RBP18.79■□□□□ 0.6
CTSB-201ENST00000345125 ADAMTS3O15072 1205 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 SLC35G1Q2M3R5 365 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 NEDD1Q8NHV4 660 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 EYA3Q99504 573 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 LZTS2Q9BRK4 669 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 FANCLQ9NW38 375 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 ATP6V0A2Q9Y487 856 aa18.79■□□□□ 0.6
CTSB-201ENST00000345125 SERPINC1P01008 464 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 UBASH3AP57075 661 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 GPKOWQ92917 476 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CTSB-201ENST00000345125 C16orf45Q96MC5 204 aaPredicted RBP18.78■□□□□ 0.6
CTSB-201ENST00000345125 KCND1Q9NSA2 647 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 CYTH3O43739 400 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
CTSB-201ENST00000345125 ARMCX5Q6P1M9 558 aa18.78■□□□□ 0.6
CTSB-201ENST00000345125 FAM177A1Q8N128 213 aaPredicted RBP18.78■□□□□ 0.6
CTSB-201ENST00000345125 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms