RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 USP14P54578 494 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 SBK1Q52WX2 424 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 TMEM179Q6ZVK1 233 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 UBE2Q1Q7Z7E8 422 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
HMGN3-202ENST00000344726 ARPP21Q9UBL0 812 aaPredicted RBP17.3■□□□□ 0.36
HMGN3-202ENST00000344726 SPDYE16A6NNV3 312 aaPredicted RBP17.29■□□□□ 0.36
HMGN3-202ENST00000344726 GIMAP6Q6P9H5 292 aa17.29■□□□□ 0.36
HMGN3-202ENST00000344726 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
HMGN3-202ENST00000344726 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
HMGN3-202ENST00000344726 TRIB2Q92519 343 aa17.29■□□□□ 0.36
HMGN3-202ENST00000344726 BTBD7Q9P203 1132 aa17.29■□□□□ 0.36
HMGN3-202ENST00000344726 MYH4Q9Y623 1939 aa17.29■□□□□ 0.36
HMGN3-202ENST00000344726 ROBO3Q96MS0 1386 aa17.28■□□□□ 0.36
HMGN3-202ENST00000344726 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
HMGN3-202ENST00000344726 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
HMGN3-202ENST00000344726 STK11IPQ8N1F8 1099 aa17.28■□□□□ 0.36
HMGN3-202ENST00000344726 USP6NLQ92738 828 aa17.28■□□□□ 0.36
HMGN3-202ENST00000344726 PAK6Q9NQU5 681 aaPredicted RBP17.28■□□□□ 0.36
HMGN3-202ENST00000344726 MINDY4BA8MYZ0 360 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 FOXP2O15409 715 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 GNAT2P19087 354 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 CYP2B6P20813 491 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 NUCB1Q02818 461 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 CCDC129Q6ZRS4 1044 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 GPR142Q7Z601 462 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 GTF3C2Q8WUA4 911 aaPredicted RBP17.27■□□□□ 0.36
HMGN3-202ENST00000344726 EVI5LQ96CN4 794 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
HMGN3-202ENST00000344726 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
HMGN3-202ENST00000344726 COL11A1P12107 1806 aaPredicted RBP17.26■□□□□ 0.35
HMGN3-202ENST00000344726 PATL2C9JE40 543 aaKnown RBP17.26■□□□□ 0.35
HMGN3-202ENST00000344726 SGPL1O95470 568 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 HMGCRP04035 888 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 RASA1P20936 1047 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 ICA1Q05084 483 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 MORN1Q5T089 497 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 NKX2-3Q8TAU0 364 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 DEFB118Q96PH6 123 aa17.26■□□□□ 0.35
HMGN3-202ENST00000344726 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGN3-202ENST00000344726 APPP05067 770 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 MAPK4P31152 587 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 TDO2P48775 406 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 CCL14Q16627 93 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 CRISPLD2Q9H0B8 497 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 TMX2Q9Y320 296 aa17.25■□□□□ 0.35
HMGN3-202ENST00000344726 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
HMGN3-202ENST00000344726 MAP3K21Q5TCX8 1036 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 SOCS4Q8WXH5 440 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 TANGO6Q9C0B7 1094 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 ARHGEF10LQ9HCE6 1279 aa17.24■□□□□ 0.35
HMGN3-202ENST00000344726 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
HMGN3-202ENST00000344726 SLC34A2O95436 690 aa17.23■□□□□ 0.35
HMGN3-202ENST00000344726 VPS53Q5VIR6 699 aa17.23■□□□□ 0.35
HMGN3-202ENST00000344726 FAM227BQ96M60 508 aa17.23■□□□□ 0.35
HMGN3-202ENST00000344726 ALPK3Q96L96 1907 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 ZNFX1Q9P2E3 1918 aaKnown RBP17.22■□□□□ 0.35
HMGN3-202ENST00000344726 PRDM1O75626 825 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 FARP2O94887 1054 aaPredicted RBP17.22■□□□□ 0.35
HMGN3-202ENST00000344726 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
HMGN3-202ENST00000344726 MNX1P50219 401 aaPredicted RBP17.22■□□□□ 0.35
HMGN3-202ENST00000344726 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 COG2Q14746 738 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 DIS3LQ8TF46 1054 aaKnown RBP17.22■□□□□ 0.35
HMGN3-202ENST00000344726 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
HMGN3-202ENST00000344726 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 CEP290O15078 2479 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
HMGN3-202ENST00000344726 RGS2P41220 211 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 CACNB2Q08289 660 aaPredicted RBP17.21■□□□□ 0.35
HMGN3-202ENST00000344726 LPAR1Q92633 364 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 APBA2Q99767 749 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 MOV10L1Q9BXT6 1211 aaKnown RBP17.21■□□□□ 0.35
HMGN3-202ENST00000344726 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 NAPBQ9H115 298 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.35
HMGN3-202ENST00000344726 IGKV6D-41A0A0C4DH26 115 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 H0YGN5 161 aa17.2■□□□□ 0.34
HMGN3-202ENST00000344726 TFRCP02786 760 aaKnown RBP17.2■□□□□ 0.34
HMGN3-202ENST00000344726 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms