RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ATP8A2Q9NTI2 1148 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 SLC4A4Q9Y6R1 1079 aa14.93□□□□□ -0.02
SGCA-202ENST00000344627 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
SGCA-202ENST00000344627 COG2Q14746 738 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 UBE3CQ15386 1083 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 TMEM179Q6ZVK1 233 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 SHCBP1Q8NEM2 672 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 DIS3LQ8TF46 1054 aaKnown RBP14.92□□□□□ -0.02
SGCA-202ENST00000344627 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 CCDC17Q96LX7 622 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
SGCA-202ENST00000344627 STAP2Q9UGK3 403 aa14.92□□□□□ -0.02
SGCA-202ENST00000344627 CYP2D7A0A087X1C5 515 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 USP17L12C9JPN9 530 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 USP17L21D6R901 530 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
SGCA-202ENST00000344627 ATP2B2Q01814 1243 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 TRIM32Q13049 653 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 GRB14Q14449 540 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 WDR78Q5VTH9 848 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 LHX8Q68G74 356 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 C7orf61Q8IZ16 206 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 ABRAQ8N0Z2 381 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
SGCA-202ENST00000344627 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
SGCA-202ENST00000344627 DDX60LQ5H9U9 1706 aaKnown RBP14.9□□□□□ -0.02
SGCA-202ENST00000344627 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
SGCA-202ENST00000344627 GUCY1A2P33402 732 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 OLFML2BQ68BL8 750 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
SGCA-202ENST00000344627 TDHQ8IZJ6 230 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 STK11IPQ8N1F8 1099 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 PUS7LQ9H0K6 701 aaKnown RBP14.9□□□□□ -0.02
SGCA-202ENST00000344627 MROH8Q9H579 483 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
SGCA-202ENST00000344627 ARHGEF10LQ9HCE6 1279 aa14.9□□□□□ -0.02
SGCA-202ENST00000344627 CEP290O15078 2479 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 SPDYE16A6NNV3 312 aaPredicted RBP14.89□□□□□ -0.03
SGCA-202ENST00000344627 DNM1LO00429 736 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 CNMDO75829 334 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 CDK8P49336 464 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 ARRDC4Q8NCT1 418 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 CRBNQ96SW2 442 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 TANGO6Q9C0B7 1094 aa14.89□□□□□ -0.03
SGCA-202ENST00000344627 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
SGCA-202ENST00000344627 AKR1B1P15121 316 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 COPB2P35606 906 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 C12orf60Q5U649 245 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 DPP9Q86TI2 863 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 KBTBD3Q8NAB2 608 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 NRBP1Q9UHY1 535 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 TMX2Q9Y320 296 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 PFASO15067 1338 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 TRIOBPQ9H2D6 2365 aa14.88□□□□□ -0.03
SGCA-202ENST00000344627 A0A1W2PRG0 241 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 MINDY4BA8MYZ0 360 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 ERC2O15083 957 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 RNF113AO15541 343 aaKnown RBP14.87□□□□□ -0.03
SGCA-202ENST00000344627 RAD21O60216 631 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 SLC25A27O95847 323 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 APPP05067 770 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 CCND3P30281 292 aaPredicted RBP14.87□□□□□ -0.03
SGCA-202ENST00000344627 ICA1Q05084 483 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 CCL14Q16627 93 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 LRRFIP1Q32MZ4 808 aaKnown RBP14.87□□□□□ -0.03
SGCA-202ENST00000344627 CTR9Q6PD62 1173 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 POTEEQ6S8J3 1075 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 STRBPQ96SI9 672 aaKnown RBP14.87□□□□□ -0.03
SGCA-202ENST00000344627 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
SGCA-202ENST00000344627 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 BTBD7Q9P203 1132 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
SGCA-202ENST00000344627 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 WDR46O15213 610 aaKnown RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 IGHA2P01877 340 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 ZFYP08048 801 aaPredicted RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 DSG3P32926 999 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 MAGEA10P43363 369 aaPredicted RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 ANKRD45Q5TZF3 282 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 C16orf86Q6ZW13 317 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 CLEC10AQ8IUN9 316 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 SPICE1Q8N0Z3 855 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 APPBP2Q92624 585 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 OSBP2Q969R2 916 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 LBHD1Q9BQE6 289 aaPredicted RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 ARPP21Q9UBL0 812 aaPredicted RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 PRKAG2Q9UGJ0 569 aa14.86□□□□□ -0.03
SGCA-202ENST00000344627 ZMYND8Q9ULU4 1186 aaPredicted RBP14.86□□□□□ -0.03
SGCA-202ENST00000344627 TDO2P48775 406 aa14.85□□□□□ -0.03
SGCA-202ENST00000344627 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
SGCA-202ENST00000344627 FSD1Q9BTV5 496 aa14.85□□□□□ -0.03
SGCA-202ENST00000344627 MOV10L1Q9BXT6 1211 aaKnown RBP14.85□□□□□ -0.03
SGCA-202ENST00000344627 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
SGCA-202ENST00000344627 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
SGCA-202ENST00000344627 DIS3Q9Y2L1 958 aaKnown RBP14.85□□□□□ -0.03
SGCA-202ENST00000344627 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
SGCA-202ENST00000344627 SEPT4O43236 478 aa14.84□□□□□ -0.03
SGCA-202ENST00000344627 GPAA1O43292 621 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms