RNA–Protein interactions for RNA: ENST00000344523.8

NR6A1-201, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NR6A1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-201ENST00000344523 KLF18A0A0U1RQI7 1052 aa27.45■■□□□ 1.98
NR6A1-201ENST00000344523 UNCXA6NJT0 531 aa27.45■■□□□ 1.98
NR6A1-201ENST00000344523 PPATQ06203 517 aa27.45■■□□□ 1.98
NR6A1-201ENST00000344523 SPICE1Q8N0Z3 855 aa27.45■■□□□ 1.98
NR6A1-201ENST00000344523 ALDH8A1Q9H2A2 487 aaPredicted RBP27.45■■□□□ 1.98
NR6A1-201ENST00000344523 TMX2Q9Y320 296 aa27.45■■□□□ 1.98
NR6A1-201ENST00000344523 USP17L10C9JJH3 530 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 ST18O60284 1047 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 HTRA3P83110 453 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 SGMS1Q86VZ5 419 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 TMTC2Q8N394 836 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 FBXL16Q8N461 479 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 TPCN1Q9ULQ1 816 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 PPP4R3BQ5MIZ7 849 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 RGMBQ6NW40 437 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 CCDC144CPQ8IYA2 1237 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 NUP133Q8WUM0 1156 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 WNK4Q96J92 1243 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 SLC12A7Q9Y666 1083 aa27.44■■□□□ 1.98
NR6A1-201ENST00000344523 HMGCS2P54868 508 aa27.43■■□□□ 1.98
NR6A1-201ENST00000344523 BACE1P56817 501 aa27.43■■□□□ 1.98
NR6A1-201ENST00000344523 GRM1Q13255 1194 aa27.43■■□□□ 1.98
NR6A1-201ENST00000344523 ZNF654Q8IZM8 581 aa27.43■■□□□ 1.98
NR6A1-201ENST00000344523 F5H6K3 240 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 KLRC3Q07444 240 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 STK3Q13188 491 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 PPIL2Q13356 520 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 PAXIP1Q6ZW49 1069 aaPredicted RBP27.42■■□□□ 1.98
NR6A1-201ENST00000344523 CATIPQ7Z7H3 387 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 MICU3Q86XE3 530 aa27.42■■□□□ 1.98
NR6A1-201ENST00000344523 ANKRD1Q15327 319 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 APOA5Q6Q788 366 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 NUP88Q99567 741 aaPredicted RBP27.41■■□□□ 1.98
NR6A1-201ENST00000344523 KIAA1683Q9H0B3 1180 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 SPRYD7Q5W111 196 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 RASAL3Q86YV0 1011 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 SH2D4AQ9H788 454 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 CREBZFQ9NS37 354 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 EMILIN3Q9NT22 766 aa27.41■■□□□ 1.98
NR6A1-201ENST00000344523 LARGE1O95461 756 aa27.4■■□□□ 1.98
NR6A1-201ENST00000344523 NDUFB10O96000 172 aa27.4■■□□□ 1.98
NR6A1-201ENST00000344523 TROAPQ12815 778 aa27.4■■□□□ 1.98
NR6A1-201ENST00000344523 SLFN13Q68D06 897 aa27.4■■□□□ 1.98
NR6A1-201ENST00000344523 VCPKMTQ9H867 229 aa27.4■■□□□ 1.98
NR6A1-201ENST00000344523 GOLGA8BA8MQT2 603 aa27.39■■□□□ 1.98
NR6A1-201ENST00000344523 PDIA3P30101 505 aaKnown RBP27.39■■□□□ 1.98
NR6A1-201ENST00000344523 USP17L2Q6R6M4 530 aa27.39■■□□□ 1.98
NR6A1-201ENST00000344523 SYNE3Q6ZMZ3 975 aa27.39■■□□□ 1.98
NR6A1-201ENST00000344523 GOPCQ9HD26 462 aa27.39■■□□□ 1.98
NR6A1-201ENST00000344523 ISY1Q9ULR0 285 aaKnown RBP27.39■■□□□ 1.98
NR6A1-201ENST00000344523 TBC1D2Q9BYX2 928 aa27.39■■□□□ 1.97
NR6A1-201ENST00000344523 LIMCH1Q9UPQ0 1083 aa27.39■■□□□ 1.97
NR6A1-201ENST00000344523 HPS5Q9UPZ3 1129 aa27.39■■□□□ 1.97
NR6A1-201ENST00000344523 KCNH4Q9UQ05 1017 aa27.39■■□□□ 1.97
NR6A1-201ENST00000344523 FRMPD2Q68DX3 1309 aaPredicted RBP27.38■■□□□ 1.97
NR6A1-201ENST00000344523 ZBTB43O43298 467 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 GOLGA8HP0CJ92 632 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 CCT2P78371 535 aaKnown RBP27.38■■□□□ 1.97
NR6A1-201ENST00000344523 ME3Q16798 604 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 CYP4F22Q6NT55 531 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 GMCL1P1Q8NEA9 526 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 PHIPQ8WWQ0 1821 aa27.38■■□□□ 1.97
NR6A1-201ENST00000344523 CXCL11O14625 94 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 PDHBP11177 359 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 EVCP57679 992 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 KCTD1Q719H9 257 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 NECAB1Q8N987 351 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 NCOA5Q9HCD5 579 aaKnown RBP27.37■■□□□ 1.97
NR6A1-201ENST00000344523 MYH4Q9Y623 1939 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 C19orf81C9J6K1 198 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 DTNBO60941 627 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 USP14P54578 494 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 GADL1Q6ZQY3 521 aa27.37■■□□□ 1.97
NR6A1-201ENST00000344523 A0A0G2JLL6 359 aaPredicted RBP27.36■■□□□ 1.97
NR6A1-201ENST00000344523 SLC1A4P43007 532 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 CCDC96Q2M329 555 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 DEFB115Q30KQ5 88 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 FAM83BQ5T0W9 1011 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 PRRT2Q7Z6L0 340 aaPredicted RBP27.36■■□□□ 1.97
NR6A1-201ENST00000344523 STAG2Q8N3U4 1231 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 GPCPD1Q9NPB8 672 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 TMOD4Q9NZQ9 345 aa27.36■■□□□ 1.97
NR6A1-201ENST00000344523 GOLGA8AA7E2F4 631 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 FAM155AB1AL88 458 aaPredicted RBP27.35■■□□□ 1.97
NR6A1-201ENST00000344523 DDAH1O94760 285 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 SLC10A3P09131 477 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 SNAPC2Q13487 334 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 FANCBQ8NB91 859 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 ZNF274Q96GC6 653 aaPredicted RBP27.35■■□□□ 1.97
NR6A1-201ENST00000344523 MS4A4AQ96JQ5 239 aa27.35■■□□□ 1.97
NR6A1-201ENST00000344523 RBM19Q9Y4C8 960 aaKnown RBP27.35■■□□□ 1.97
NR6A1-201ENST00000344523 ZBTB48P10074 688 aaPredicted RBP27.34■■□□□ 1.97
NR6A1-201ENST00000344523 VCAM1P19320 739 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 METAP2P50579 478 aaKnown RBP eCLIP27.34■■□□□ 1.97
NR6A1-201ENST00000344523 CMTR1Q8N1G2 835 aaKnown RBP27.34■■□□□ 1.97
NR6A1-201ENST00000344523 CPVLQ9H3G5 476 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 SYNPO2Q9UMS6 1093 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 CDC27P30260 824 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 SH3D19Q5HYK7 790 aa27.34■■□□□ 1.97
NR6A1-201ENST00000344523 TREML2Q5T2D2 321 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms