RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 TATDN2Q93075 761 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 CTAGE1Q96RT6 745 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 PSMD1Q99460 953 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 DESI2Q9BSY9 194 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 SELENOOQ9BVL4 669 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATG4A-201ENST00000343524 USP44Q9H0E7 712 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 SALL1Q9NSC2 1324 aa9.15□□□□□ -0.94
ATG4A-201ENST00000343524 TMEM232C9JQI7 657 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 PPFIA3O75145 1194 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 SNUPNO95149 360 aaKnown RBP9.15□□□□□ -0.95
ATG4A-201ENST00000343524 PFKFB1P16118 471 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 FECHP22830 423 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 SYKP43405 635 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 NAP1L1P55209 391 aaKnown RBP9.15□□□□□ -0.95
ATG4A-201ENST00000343524 TRIM14Q14142 442 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 NAA25Q14CX7 972 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 Q6ZUG5 572 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC13Q8IYE1 715 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC26Q8TAB7 109 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 SAAL1Q96ER3 474 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 COG3Q96JB2 828 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 SLC40A1Q9NP59 571 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 SH3BP1Q9Y3L3 701 aa9.15□□□□□ -0.95
ATG4A-201ENST00000343524 CARMIL3Q8ND23 1372 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 FAM237AA0A1B0GTK4 181 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 LIN7AO14910 233 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-201ENST00000343524 GRIN3BO60391 1043 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 HSF2BPO75031 334 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC121Q6ZUS5 278 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 MLKLQ8NB16 471 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 ENOX1Q8TC92 643 aaKnown RBP9.14□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC47Q96A33 483 aaKnown RBP9.14□□□□□ -0.95
ATG4A-201ENST00000343524 FSD1Q9BTV5 496 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 FTOQ9C0B1 505 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATG4A-201ENST00000343524 EPN3Q9H201 632 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 FANCLQ9NW38 375 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 BABAM1Q9NWV8 329 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 WWC3Q9ULE0 1092 aa9.14□□□□□ -0.95
ATG4A-201ENST00000343524 ZNF18P17022 549 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 PBX2P40425 430 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ADKP55263 362 aaKnown RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 AMPD2Q01433 879 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 NNTQ13423 1086 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 TTC19Q6DKK2 380 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 TLDC1Q6P9B6 456 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 EMBQ6PCB8 327 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 KDM7AQ6ZMT4 941 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 MCM10Q7L590 875 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CEP57Q86XR8 500 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 APLFQ8IW19 511 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 NOA1Q8NC60 698 aaKnown RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC114Q96M63 670 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 SIL1Q9H173 461 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 INTS13Q9NVM9 706 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ITIH6Q6UXX5 1313 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ANKARQ7Z5J8 1434 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 A0A1B0GTH6 734 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 SOWAHDA6NJG2 315 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 PSMD14O00487 310 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 SEMA3EO15041 775 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 MFAP3LO75121 409 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 PPP6R2O75170 966 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ATP5JP18859 108 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 EPHB4P54760 987 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 SKIDA1Q1XH10 827 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 RNF187Q5TA31 235 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 EMC10Q5UCC4 262 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CYB5D1Q6P9G0 228 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 BARGINQ6ZT62 677 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 TRAPPC11Q7Z392 1133 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 C1orf131Q8NDD1 294 aaKnown RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 DDX54Q8TDD1 881 aaKnown RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ZNF274Q96GC6 653 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CDK19Q9BWU1 502 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 STK32BQ9NY57 414 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
ATG4A-201ENST00000343524 DDX20Q9UHI6 824 aaKnown RBP9.13□□□□□ -0.95
ATG4A-201ENST00000343524 ANO9A1A5B4 782 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 AGPSO00116 658 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 DTNBO60941 627 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 PECAM1P16284 738 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-201ENST00000343524 CCNHP51946 323 aaPredicted RBP9.12□□□□□ -0.95
ATG4A-201ENST00000343524 ITIH3Q06033 890 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 GOLGA8FQ08AF8 430 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 GOLGA8DPQ0D2H9 430 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 SAFB2Q14151 953 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATG4A-201ENST00000343524 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 MYSM1Q5VVJ2 828 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 NAA35Q5VZE5 725 aa9.12□□□□□ -0.95
ATG4A-201ENST00000343524 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms