RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 FDX1P10109 184 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 BMP3P12645 472 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 GRK4P32298 578 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 NMIQ13287 307 aaPredicted RBP4.9□□□□□ -1.62
BPTF-204ENST00000342579 FAM47AQ5JRC9 791 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 CCDC174Q6PII3 467 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 PLEKHH3Q7Z736 793 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 TRIM22Q8IYM9 498 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.9□□□□□ -1.62
BPTF-204ENST00000342579 DYNLL2Q96FJ2 89 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 HMX1Q9NP08 348 aaPredicted RBP4.9□□□□□ -1.62
BPTF-204ENST00000342579 ADD3Q9UEY8 706 aaKnown RBP4.9□□□□□ -1.62
BPTF-204ENST00000342579 AGTPBP1Q9UPW5 1226 aa4.9□□□□□ -1.62
BPTF-204ENST00000342579 PASKQ96RG2 1323 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 BTBD19C9JJ37 291 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 PRKAB2O43741 272 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 CYP2C8P10632 490 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 SDSP20132 328 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 STAT3P40763 770 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 CRHR2Q13324 411 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 LRRC47Q8N1G4 583 aaKnown RBP4.9□□□□□ -1.63
BPTF-204ENST00000342579 ABHD8Q96I13 439 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 MCOLN1Q9GZU1 580 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 BRMS1Q9HCU9 246 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 SLC12A7Q9Y666 1083 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 RAD50Q92878 1312 aa4.9□□□□□ -1.63
BPTF-204ENST00000342579 TLR2O60603 784 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SLC25A27O95847 323 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 HSPA8P11142 646 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 PCP11498 1178 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 SOX10P56693 466 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 IRF5Q13568 498 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 EXOC8Q8IYI6 725 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SMARCC2Q8TAQ2 1214 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SOCS4Q8WXH5 440 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SLF1Q9BQI6 1058 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 RPAP1Q9BWH6 1393 aaPredicted RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 GAKO14976 1311 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 WDR46O15213 610 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 TBC1D12O60347 775 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 TOP1P11387 765 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 GRIK5Q16478 980 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 FAM47CQ5HY64 1035 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 LDLRAD1Q5T700 205 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 PRPF38AQ8NAV1 312 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 ARRDC4Q8NCT1 418 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 MMP19Q99542 508 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 ZCCHC17Q9NP64 241 aaKnown RBP4.89□□□□□ -1.63
BPTF-204ENST00000342579 FAM198AQ9UFP1 575 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 CCPG1Q9ULG6 757 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 RABGAP1Q9Y3P9 1069 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 LAMB4A4D0S4 1761 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 STAT2P52630 851 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 CTDSPL2Q05D32 466 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SAFBQ15424 915 aaKnown RBP eCLIP4.89□□□□□ -1.63
BPTF-204ENST00000342579 AKNAD1Q5T1N1 836 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 BLOC1S2Q6QNY1 142 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SLAIN1Q8ND83 568 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 ZNF831Q5JPB2 1677 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 KDM3BQ7LBC6 1761 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 AOX1Q06278 1338 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 SCN7AQ01118 1682 aa4.89□□□□□ -1.63
BPTF-204ENST00000342579 EEF2P13639 858 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 MCM5P33992 734 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 TM4SF4P48230 202 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 HERVK_113P62684 666 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 NUCB1Q02818 461 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CCDC129Q6ZRS4 1044 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 FAM184AQ8NB25 1140 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CCDC12Q8WUD4 166 aaPredicted RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 STRBPQ96SI9 672 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 TRAIPQ9BWF2 469 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 ASCC2Q9H1I8 757 aaPredicted RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 MTIF3Q9H2K0 278 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 VCPKMTQ9H867 229 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 SLC24A3Q9HC58 644 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 FEM1BQ9UK73 627 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 COL5A3P25940 1745 aaPredicted RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 CALM1P0DP23 149 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CALM2P0DP24 149 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CALM3P0DP25 149 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 PTMSP20962 102 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 NT5C2P49902 561 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 PDE4DQ08499 809 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 FAM83BQ5T0W9 1011 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 GPATCH4Q5T3I0 446 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 SNRNP48Q6IEG0 339 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 MCF2L2Q86YR7 1114 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 JMYQ8N9B5 988 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 BRI3BPQ8WY22 251 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 PUS7LQ9H0K6 701 aaKnown RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 EHD4Q9H223 541 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 ZNF609O15014 1411 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 COL1A1P02452 1464 aaPredicted RBP4.88□□□□□ -1.63
BPTF-204ENST00000342579 CYP2D7A0A087X1C5 515 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 F5H6K3 240 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CYP2D6P10635 497 aa4.88□□□□□ -1.63
BPTF-204ENST00000342579 CALML3P27482 149 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms