RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 FIBPO43427 364 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 TNNT1P13805 278 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 CDK8P49336 464 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 KMT5BQ4FZB7 885 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 FAM173BQ6P4H8 233 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 TCP11L1Q9NUJ3 509 aa16.83■□□□□ 0.29
PBX3-201ENST00000342287 DDAH1O94760 285 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
PBX3-201ENST00000342287 TSPY3P0CV98 308 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 TSPY8P0CW00 308 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 CASQ1P31415 396 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 GUCY1B3Q02153 619 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 DGKHQ86XP1 1220 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 NEK11Q8NG66 645 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 DRC1Q96MC2 740 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 ALG1Q9BT22 464 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 ZNF277Q9NRM2 450 aaPredicted RBP16.83■□□□□ 0.28
PBX3-201ENST00000342287 GUCY2CP25092 1073 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 RBM5P52756 815 aaKnown RBP eCLIP16.83■□□□□ 0.28
PBX3-201ENST00000342287 TROAPQ12815 778 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 TRIM22Q8IYM9 498 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 SLC44A5Q8NCS7 719 aa16.83■□□□□ 0.28
PBX3-201ENST00000342287 C16orf45Q96MC5 204 aaPredicted RBP16.83■□□□□ 0.28
PBX3-201ENST00000342287 SCAND2PQ9GZW5 306 aaPredicted RBP16.83■□□□□ 0.28
PBX3-201ENST00000342287 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
PBX3-201ENST00000342287 RASA1P20936 1047 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 WASF1Q92558 559 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 ANKS1AQ92625 1134 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
PBX3-201ENST00000342287 IL17RBQ9NRM6 502 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
PBX3-201ENST00000342287 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.82■□□□□ 0.28
PBX3-201ENST00000342287 V9GYY5 206 aaPredicted RBP16.82■□□□□ 0.28
PBX3-201ENST00000342287 MYO1CO00159 1063 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 GADD45BO75293 160 aaPredicted RBP16.82■□□□□ 0.28
PBX3-201ENST00000342287 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
PBX3-201ENST00000342287 SPC24Q8NBT2 197 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
PBX3-201ENST00000342287 UBE2HP62256 183 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 ZNF397Q8NF99 534 aaPredicted RBP16.81■□□□□ 0.28
PBX3-201ENST00000342287 KCNF1Q9H3M0 494 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 ZNF446Q9NWS9 450 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 OTUD7BQ6GQQ9 843 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 CREBRFQ8IUR6 639 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 CCDC112Q8NEF3 446 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 SGIP1Q9BQI5 828 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
PBX3-201ENST00000342287 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
PBX3-201ENST00000342287 LCMT1Q9UIC8 334 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 CFAP45Q9UL16 551 aa16.81■□□□□ 0.28
PBX3-201ENST00000342287 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
PBX3-201ENST00000342287 SMTNL1A8MU46 457 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 KAT14Q9H8E8 782 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.8■□□□□ 0.28
PBX3-201ENST00000342287 TRIM29Q14134 588 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
PBX3-201ENST00000342287 KRBA2Q6ZNG9 492 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 ELP1O95163 1332 aa16.8■□□□□ 0.28
PBX3-201ENST00000342287 DEXIO95424 95 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 VIL1P09327 827 aaKnown RBP16.79■□□□□ 0.28
PBX3-201ENST00000342287 CCDC82Q8N4S0 544 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 NEDD1Q8NHV4 660 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
PBX3-201ENST00000342287 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 GABPAQ06546 454 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 CMTR1Q8N1G2 835 aaKnown RBP16.79■□□□□ 0.28
PBX3-201ENST00000342287 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
PBX3-201ENST00000342287 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 TCHHQ07283 1943 aa16.79■□□□□ 0.28
PBX3-201ENST00000342287 FOCADQ5VW36 1801 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 RAD17O75943 681 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 NFIAQ12857 509 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
PBX3-201ENST00000342287 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 SWAP70Q9UH65 585 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 PCDHAC2Q9Y5I4 1007 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 MYH1P12882 1939 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 PSMD14O00487 310 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
PBX3-201ENST00000342287 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 KRT40Q6A162 431 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
PBX3-201ENST00000342287 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms