RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
COL18A1-201ENST00000342220 FAM217BQ9NTX9 383 aaPredicted RBP14.97□□□□□ -0.01
COL18A1-201ENST00000342220 GPR75-ASB3A0A0A6YYF3 556 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 GOLGA6L6A8MZA4 724 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 LIFRP42702 1097 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 KCTD1Q719H9 257 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 TMC4Q7Z404 712 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 TRERF1Q96PN7 1200 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 SERPINB13Q9UIV8 391 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 FZD1Q9UP38 647 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 DDX60Q8IY21 1712 aaKnown RBP14.96□□□□□ -0.01
COL18A1-201ENST00000342220 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 RGL2O15211 777 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 XBP1P17861 261 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 RHBDL3P58872 404 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 TBC1D10BQ4KMP7 808 aaPredicted RBP14.96□□□□□ -0.01
COL18A1-201ENST00000342220 CSRNP1Q96S65 589 aa14.96□□□□□ -0.01
COL18A1-201ENST00000342220 ZNF174Q15697 407 aa14.96□□□□□ -0.02
COL18A1-201ENST00000342220 NLGN2Q8NFZ4 835 aa14.96□□□□□ -0.02
COL18A1-201ENST00000342220 TMEM47Q9BQJ4 181 aa14.96□□□□□ -0.02
COL18A1-201ENST00000342220 ZSCAN16Q9H4T2 348 aaPredicted RBP14.96□□□□□ -0.02
COL18A1-201ENST00000342220 ZNF287Q9HBT7 754 aa14.96□□□□□ -0.02
COL18A1-201ENST00000342220 AKAP11Q9UKA4 1901 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 DDTLA6NHG4 134 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-201ENST00000342220 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
COL18A1-201ENST00000342220 RASA1P20936 1047 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 STYK1Q6J9G0 422 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 CREBRFQ8IUR6 639 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 DNAJC25Q9H1X3 360 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 ARAP2Q8WZ64 1704 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 TPM3P06753 285 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 PIK3AP1Q6ZUJ8 805 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 CDAN1Q8IWY9 1227 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 DRC7Q8IY82 874 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 SRBD1Q8N5C6 995 aaKnown RBP14.95□□□□□ -0.02
COL18A1-201ENST00000342220 NUP88Q99567 741 aaPredicted RBP14.95□□□□□ -0.02
COL18A1-201ENST00000342220 AGXT2Q9BYV1 514 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 NRBP1Q9UHY1 535 aa14.95□□□□□ -0.02
COL18A1-201ENST00000342220 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-201ENST00000342220 RBM43Q6ZSC3 357 aaKnown RBP14.94□□□□□ -0.02
COL18A1-201ENST00000342220 CCDC186Q7Z3E2 898 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 COL24A1Q17RW2 1714 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 KLRF2D3W0D1 207 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 LRMPQ12912 555 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 APOBEC3HQ6NTF7 200 aaKnown RBP14.94□□□□□ -0.02
COL18A1-201ENST00000342220 SAMD7Q7Z3H4 446 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 PLIN2Q99541 437 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 TAOK3Q9H2K8 898 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 USP17L5A8MUK1 530 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 SPTLC2O15270 562 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 KIF23Q02241 960 aaPredicted RBP14.94□□□□□ -0.02
COL18A1-201ENST00000342220 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
COL18A1-201ENST00000342220 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
COL18A1-201ENST00000342220 TAL1P17542 331 aaPredicted RBP14.93□□□□□ -0.02
COL18A1-201ENST00000342220 MCM7P33993 719 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 GTF2F1P35269 517 aaKnown RBP eCLIP14.93□□□□□ -0.022e-8■■■■□ 19.8
COL18A1-201ENST00000342220 SGMS1Q86VZ5 419 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 DEXIO95424 95 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 KIF5BP33176 963 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 ZNF165P49910 485 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 SEC23AQ15436 765 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 HSP90AA4PQ58FG1 418 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 DACT2Q5SW24 774 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
COL18A1-201ENST00000342220 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 ERICH4A6NGS2 130 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 CDC25AP30304 524 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 STRIP1Q5VSL9 837 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 STAMQ92783 540 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 TIGD1Q96MW7 591 aa14.93□□□□□ -0.02
COL18A1-201ENST00000342220 CCDC66A2RUB6 948 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 IFNAR1P17181 557 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 TROAPQ12815 778 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 DHX8Q14562 1220 aaKnown RBP14.92□□□□□ -0.02
COL18A1-201ENST00000342220 NBPF9Q3BBW0 867 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 WASF1Q92558 559 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 TMEM39BQ9GZU3 492 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 BRMS1Q9HCU9 246 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 ECM2O94769 699 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-201ENST00000342220 PARP1P09874 1014 aaKnown RBP14.92□□□□□ -0.02
COL18A1-201ENST00000342220 ZNF75DP51815 510 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 NAPAP54920 295 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 SEPT2Q15019 361 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 NTRK3Q16288 839 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 CERKLQ49MI3 558 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-201ENST00000342220 TTBK2Q6IQ55 1244 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 PCDHA7Q9UN72 937 aa14.92□□□□□ -0.02
COL18A1-201ENST00000342220 MARCH6O60337 910 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 JAKMIP3Q5VZ66 844 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 TRMT1LQ7Z2T5 733 aaKnown RBP14.91□□□□□ -0.02
COL18A1-201ENST00000342220 COA7Q96BR5 231 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 SEC63Q9UGP8 760 aaKnown RBP14.91□□□□□ -0.02
COL18A1-201ENST00000342220 RIOK3O14730 519 aaKnown RBP14.91□□□□□ -0.02
COL18A1-201ENST00000342220 FMNL1O95466 1100 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-201ENST00000342220 CXCL9Q07325 125 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms