RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 SRBD1Q8N5C6 995 aaKnown RBP8.28□□□□□ -1.08
PTPRR-202ENST00000342084 ZNF579Q8NAF0 562 aaKnown RBP8.28□□□□□ -1.08
PTPRR-202ENST00000342084 SPATA20Q8TB22 786 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 CELF1Q92879 486 aaKnown RBP8.28□□□□□ -1.08
PTPRR-202ENST00000342084 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 AK7Q96M32 723 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 AATFQ9NY61 560 aaKnown RBP eCLIP8.28□□□□□ -1.08
PTPRR-202ENST00000342084 DACH1Q9UI36 760 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 MAPK8IP1Q9UQF2 711 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 XDHP47989 1333 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 CACNA1SQ13698 1873 aa8.28□□□□□ -1.08
PTPRR-202ENST00000342084 A0A1B0GTH6 734 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 KCNQ2O43526 872 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MCM7P33993 719 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PPP2R3AQ06190 1150 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 TROAPQ12815 778 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PTGDRQ13258 359 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 IL17AQ16552 155 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PARP10Q53GL7 1025 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 TTC38Q5R3I4 469 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PIK3AP1Q6ZUJ8 805 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 FCHSD1Q86WN1 690 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 CREBRFQ8IUR6 639 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ANAPC4Q9UJX5 808 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MTMR7Q9Y216 660 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MYH14Q7Z406 1995 aaKnown RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ZNF804BA4D1E1 1349 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 AKR1B15C9JRZ8 316 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 PRPF3O43395 683 aaKnown RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MYO1BO43795 1136 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 STX10O60499 249 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 SASH3O75995 380 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ABL1P00519 1130 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 TMTC3Q6ZXV5 915 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 ELOA2Q8IYF1 753 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MARCH10Q8NA82 808 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 RASGRP4Q8TDF6 673 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 CCDC12Q8WUD4 166 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 FAM84BQ96KN1 310 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 MRFAP1Q9Y605 127 aa8.27□□□□□ -1.09
PTPRR-202ENST00000342084 BAZ2BQ9UIF8 2168 aaKnown RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 ZRANB2O95218 330 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 XBP1P17861 261 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 ERCC5P28715 1186 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 PRDX5P30044 214 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 CASP14P31944 242 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 FXR1P51114 621 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 NLRP5P59047 1200 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 MAP3K9P80192 1104 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 MECOMQ03112 1051 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 BMS1Q14692 1282 aaKnown RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 DDB1Q16531 1140 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 CDKAL1Q5VV42 579 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 SPATA1Q5VX52 437 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 KANK3Q6NY19 840 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 TMCO3Q6UWJ1 677 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 ACRBPQ8NEB7 543 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 MTRQ99707 1265 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 VPS16Q9H269 839 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 ADD3Q9UEY8 706 aaKnown RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 PUF60Q9UHX1 559 aaKnown RBP8.26□□□□□ -1.09
PTPRR-202ENST00000342084 FAM205AQ6ZU69 1335 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 RREB1Q92766 1687 aa8.26□□□□□ -1.09
PTPRR-202ENST00000342084 EFCAB8A8MWE9 144 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 KIF20AO95235 890 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 GYPCP04921 128 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 RRAGBQ5VZM2 374 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 IQCA1Q86XH1 822 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 CCDC34Q96HJ3 373 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 PLIN2Q99541 437 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 GNL3LQ9NVN8 582 aaKnown RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 TAB2Q9NYJ8 693 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 GDAQ9Y2T3 454 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 SCN7AQ01118 1682 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 A0A1B0GUL6 1792 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 LAMB2P55268 1798 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 MYH13Q9UKX3 1938 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 PP2D1A8MPX8 630 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 MFAP3LO75121 409 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 TUBB4AP04350 444 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 CCDC175P0C221 793 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 HOXD11P31277 338 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 PBX1P40424 430 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 RCAN1P53805 252 aa8.25□□□□□ -1.09
PTPRR-202ENST00000342084 ATP2C1P98194 919 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-202ENST00000342084 KRT31Q15323 416 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms