RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TANGO6Q9C0B7 1094 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 LOC285556D6RIA3 1793 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 SPDYE16A6NNV3 312 aaPredicted RBP24.1■■□□□ 1.45
SYNE2-201ENST00000341472 TFRCP02786 760 aaKnown RBP24.1■■□□□ 1.45
SYNE2-201ENST00000341472 EEF2P13639 858 aaKnown RBP24.1■■□□□ 1.45
SYNE2-201ENST00000341472 CAPN2P17655 700 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 KIAA1755Q5JYT7 1200 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 ZMYM1Q5SVZ6 1142 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 IFNL3Q8IZI9 196 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 DEFB118Q96PH6 123 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 VCPKMTQ9H867 229 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 BTBD7Q9P203 1132 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 ATAD5Q96QE3 1844 aa24.1■■□□□ 1.45
SYNE2-201ENST00000341472 PDE1AP54750 535 aa24.09■■□□□ 1.45
SYNE2-201ENST00000341472 SPICE1Q8N0Z3 855 aa24.09■■□□□ 1.45
SYNE2-201ENST00000341472 EVI5LQ96CN4 794 aa24.09■■□□□ 1.45
SYNE2-201ENST00000341472 ZNF287Q9HBT7 754 aa24.09■■□□□ 1.45
SYNE2-201ENST00000341472 RGS2P41220 211 aa24.08■■□□□ 1.45
SYNE2-201ENST00000341472 MORN1Q5T089 497 aa24.08■■□□□ 1.45
SYNE2-201ENST00000341472 WDR78Q5VTH9 848 aa24.08■■□□□ 1.45
SYNE2-201ENST00000341472 TRMT44Q8IYL2 757 aaKnown RBP24.08■■□□□ 1.45
SYNE2-201ENST00000341472 ZNF444Q8N0Y2 327 aaPredicted RBP24.08■■□□□ 1.45
SYNE2-201ENST00000341472 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.45
SYNE2-201ENST00000341472 USP6NLQ92738 828 aa24.08■■□□□ 1.45
SYNE2-201ENST00000341472 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.08■■□□□ 1.45
SYNE2-201ENST00000341472 EPB41L4AQ9HCS5 686 aaPredicted RBP24.08■■□□□ 1.45
SYNE2-201ENST00000341472 RASA1P20936 1047 aa24.07■■□□□ 1.44
SYNE2-201ENST00000341472 LNPKQ9C0E8 428 aa24.07■■□□□ 1.44
SYNE2-201ENST00000341472 HMX1Q9NP08 348 aaPredicted RBP24.07■■□□□ 1.44
SYNE2-201ENST00000341472 PAK6Q9NQU5 681 aaPredicted RBP24.07■■□□□ 1.44
SYNE2-201ENST00000341472 FLOT1O75955 427 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 DSG3P32926 999 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 TRIM32Q13049 653 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 B4GALNT3Q6L9W6 998 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 SMC5Q8IY18 1101 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 TRIB2Q92519 343 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.06■■□□□ 1.44
SYNE2-201ENST00000341472 RPTORQ8N122 1335 aa24.06■■□□□ 1.44
SYNE2-201ENST00000341472 SLC15A5A6NIM6 579 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 WDR46O15213 610 aaKnown RBP24.05■■□□□ 1.44
SYNE2-201ENST00000341472 PTPREP23469 700 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 MAP2K5Q13163 448 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 MB21D1Q8N884 522 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 NAPBQ9H115 298 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 GOPCQ9HD26 462 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 IVNS1ABPQ9Y6Y0 642 aa24.05■■□□□ 1.44
SYNE2-201ENST00000341472 RAD21O60216 631 aa24.04■■□□□ 1.44
SYNE2-201ENST00000341472 FARP2O94887 1054 aaPredicted RBP24.04■■□□□ 1.44
SYNE2-201ENST00000341472 IGHDP01880 384 aa24.04■■□□□ 1.44
SYNE2-201ENST00000341472 SLC3A2P08195 630 aaKnown RBP24.04■■□□□ 1.44
SYNE2-201ENST00000341472 ZKSCAN1P17029 563 aaPredicted RBP24.04■■□□□ 1.44
SYNE2-201ENST00000341472 UBE2Q1Q7Z7E8 422 aa24.04■■□□□ 1.44
SYNE2-201ENST00000341472 CRISPLD2Q9H0B8 497 aa24.04■■□□□ 1.44
SYNE2-201ENST00000341472 SUPT16HQ9Y5B9 1047 aaKnown RBP24.04■■□□□ 1.44
SYNE2-201ENST00000341472 DDX60LQ5H9U9 1706 aaKnown RBP24.04■■□□□ 1.44
SYNE2-201ENST00000341472 NAV1Q8NEY1 1877 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 PRDM1O75626 825 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 SAMD1Q6SPF0 538 aaPredicted RBP24.03■■□□□ 1.44
SYNE2-201ENST00000341472 DPF3Q92784 378 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 MOV10L1Q9BXT6 1211 aaKnown RBP24.03■■□□□ 1.44
SYNE2-201ENST00000341472 SPATC1LQ9H0A9 340 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 NYAP2Q9P242 653 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 BRCA2P51587 3418 aa24.03■■□□□ 1.44
SYNE2-201ENST00000341472 MKI67P46013 3256 aaKnown RBP24.02■■□□□ 1.44
SYNE2-201ENST00000341472 PRKAR2AP13861 404 aaKnown RBP24.02■■□□□ 1.44
SYNE2-201ENST00000341472 PDE4BQ07343 736 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 MAP3K21Q5TCX8 1036 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 TICAM2Q86XR7 235 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 ATG4CQ96DT6 458 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 APBA2Q99767 749 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 HTATIP2Q9BUP3 242 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 CLIP2Q9UDT6 1046 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 ROBO3Q96MS0 1386 aa24.02■■□□□ 1.44
SYNE2-201ENST00000341472 STRNO43815 780 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 PLS1Q14651 629 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 CCL14Q16627 93 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 CCDC129Q6ZRS4 1044 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 SHCBP1Q8NEM2 672 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 HELLSQ9NRZ9 838 aa24.01■■□□□ 1.43
SYNE2-201ENST00000341472 F5H6K3 240 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 NUCB1Q02818 461 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 KLRC3Q07444 240 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 PPARAQ07869 468 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 CACNB2Q08289 660 aaPredicted RBP24■■□□□ 1.43
SYNE2-201ENST00000341472 GRB14Q14449 540 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 MGAMO43451 1857 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 DOCK3Q8IZD9 2030 aa24■■□□□ 1.43
SYNE2-201ENST00000341472 IGKV6D-41A0A0C4DH26 115 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 TRIM6-TRIM34B2RNG4 842 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 HOXC6P09630 235 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 ERCC3P19447 782 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 FAM83BQ5T0W9 1011 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 MFSD14CQ5VZR4 134 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 DPP9Q86TI2 863 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 MKL1Q969V6 931 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 MROH8Q9H579 483 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 FBXO28Q9NVF7 368 aa23.99■■□□□ 1.43
SYNE2-201ENST00000341472 ADAMTS5Q9UNA0 930 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms