RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 KAT6BQ8WYB5 2073 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 ARHGAP25P42331 645 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 AMPD2Q01433 879 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 SRLQ86TD4 932 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 ZNF654Q8IZM8 581 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 CPLX3Q8WVH0 158 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 ABHD10Q9NUJ1 306 aa23.42■■□□□ 1.34
CLPB-202ENST00000340729 MYO1CO00159 1063 aa23.41■■□□□ 1.34
CLPB-202ENST00000340729 SPATA5Q8NB90 893 aa23.41■■□□□ 1.34
CLPB-202ENST00000340729 ACBD3Q9H3P7 528 aa23.41■■□□□ 1.34
CLPB-202ENST00000340729 MED4Q9NPJ6 270 aa23.41■■□□□ 1.34
CLPB-202ENST00000340729 CASP8Q14790 479 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 KLHL10Q6JEL2 608 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 SYMPKQ92797 1274 aaKnown RBP23.4■■□□□ 1.34
CLPB-202ENST00000340729 TRERF1Q96PN7 1200 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 PHF20Q9BVI0 1012 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 IQSEC3Q9UPP2 1182 aaPredicted RBP23.4■■□□□ 1.34
CLPB-202ENST00000340729 MROH5Q6ZUA9 1318 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 RTL9Q8NET4 1388 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 AFMP43652 599 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 STX17P56962 302 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 VSNL1P62760 191 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 ERVK-24P63145 666 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 EPSTI1Q96J88 318 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 PYM1Q9BRP8 204 aaKnown RBP23.4■■□□□ 1.34
CLPB-202ENST00000340729 VIPAS39Q9H9C1 493 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
CLPB-202ENST00000340729 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
CLPB-202ENST00000340729 ARMT1Q9H993 441 aa23.39■■□□□ 1.34
CLPB-202ENST00000340729 RWDD2AQ9UIY3 292 aa23.39■■□□□ 1.34
CLPB-202ENST00000340729 KRT2P35908 639 aa23.39■■□□□ 1.33
CLPB-202ENST00000340729 KRT31Q15323 416 aa23.39■■□□□ 1.33
CLPB-202ENST00000340729 ACRBPQ8NEB7 543 aa23.39■■□□□ 1.33
CLPB-202ENST00000340729 CDC5LQ99459 802 aaKnown RBP23.39■■□□□ 1.33
CLPB-202ENST00000340729 MYH8P13535 1937 aa23.38■■□□□ 1.33
CLPB-202ENST00000340729 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
CLPB-202ENST00000340729 MYO6Q9UM54 1294 aa23.38■■□□□ 1.33
CLPB-202ENST00000340729 TDO2P48775 406 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 HSP90B2PQ58FF3 399 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 SYNE4Q8N205 404 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 SHISA4Q96DD7 197 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 MKRN1Q9UHC7 482 aaKnown RBP23.37■■□□□ 1.33
CLPB-202ENST00000340729 IRS4O14654 1257 aaPredicted RBP23.37■■□□□ 1.33
CLPB-202ENST00000340729 PRPF3O43395 683 aaKnown RBP23.37■■□□□ 1.33
CLPB-202ENST00000340729 PDE8AO60658 829 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 ATP2B1P20020 1258 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 MCM3P25205 808 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 SEC23AQ15436 765 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 ANKRD20A12PQ8NF67 263 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 FAN1Q9Y2M0 1017 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 RRP15Q9Y3B9 282 aaKnown RBP23.37■■□□□ 1.33
CLPB-202ENST00000340729 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
CLPB-202ENST00000340729 N4BP3O15049 544 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 AARSP49588 968 aaKnown RBP eCLIP23.36■■□□□ 1.33
CLPB-202ENST00000340729 COPB1P53618 953 aaKnown RBP23.36■■□□□ 1.33
CLPB-202ENST00000340729 AKAP17AQ02040 695 aaKnown RBP23.36■■□□□ 1.33
CLPB-202ENST00000340729 E2F4Q16254 413 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 PKN1Q16512 942 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 RRP12Q5JTH9 1297 aaKnown RBP23.36■■□□□ 1.33
CLPB-202ENST00000340729 PIGBQ92521 554 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 ZKSCAN3Q9BRR0 538 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 TRIM34Q9BYJ4 488 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 CTNND2Q9UQB3 1225 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 RHOXF2BP0C7M4 288 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 SLC5A1P13866 664 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 FUT2Q10981 343 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 RASGRF1Q13972 1273 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 RHOXF2Q9BQY4 288 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 UBAC1Q9BSL1 405 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 ANAPC4Q9UJX5 808 aa23.36■■□□□ 1.33
CLPB-202ENST00000340729 PSMD14O00487 310 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 STARD3NLO95772 234 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 ATP2C1P98194 919 aaPredicted RBP23.35■■□□□ 1.33
CLPB-202ENST00000340729 ZNF662Q6ZS27 426 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 TRAPPC11Q7Z392 1133 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 CMTR1Q8N1G2 835 aaKnown RBP23.35■■□□□ 1.33
CLPB-202ENST00000340729 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 CTCFLQ8NI51 663 aaPredicted RBP23.35■■□□□ 1.33
CLPB-202ENST00000340729 NUP133Q8WUM0 1156 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 TNFRSF25Q93038 417 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
CLPB-202ENST00000340729 SLC4A4Q9Y6R1 1079 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 XDHP47989 1333 aa23.35■■□□□ 1.33
CLPB-202ENST00000340729 MYH2Q9UKX2 1941 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 N4BP1O75113 896 aaKnown RBP23.34■■□□□ 1.33
CLPB-202ENST00000340729 SMYD4Q8IYR2 804 aaPredicted RBP23.34■■□□□ 1.33
CLPB-202ENST00000340729 LCORLQ8N3X6 602 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 SUGCTQ9HAC7 445 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 LCMT1Q9UIC8 334 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 FAM205CA6NFA0 338 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 PRKAB2O43741 272 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 HLFQ16534 295 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 TCP11X2Q5H9J9 407 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 EARS2Q5JPH6 523 aaKnown RBP23.34■■□□□ 1.33
CLPB-202ENST00000340729 DNAJC10Q8IXB1 793 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 CCDC148Q8NFR7 591 aa23.34■■□□□ 1.33
CLPB-202ENST00000340729 NUP88Q99567 741 aaPredicted RBP23.34■■□□□ 1.33
CLPB-202ENST00000340729 HAUS4Q9H6D7 363 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms