RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FAM160B2Q86V87 743 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 LPAR1Q92633 364 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 C12orf42Q96LP6 360 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 PHF20Q9BVI0 1012 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 RTEL1Q9NZ71 1219 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 ZNF541Q9H0D2 1346 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 CYP2D7A0A087X1C5 515 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 IQCA1LA6NCM1 817 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 ASNSP08243 561 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 HOXA7P31268 230 aaPredicted RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 PRELPP51888 382 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 SUPT20HL1Q3ZLR7 823 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 TEPSINQ96N21 525 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 TDRD3Q9H7E2 651 aaKnown RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 DNAJC18Q9H819 358 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 MAP3K20Q9NYL2 800 aaKnown RBP8.3□□□□□ -1.08
NUP43-201ENST00000340413 CEP131Q9UPN4 1083 aa8.3□□□□□ -1.08
NUP43-201ENST00000340413 FAM237AA0A1B0GTK4 181 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 GHRHRQ02643 423 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 RASSF7Q02833 373 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 NFIAQ12857 509 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 DYNLL2Q96FJ2 89 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 MXD3Q9BW11 206 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 AS3MTQ9HBK9 375 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 SAP30BPQ9UHR5 308 aaKnown RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 RCOR1Q9UKL0 485 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 TMX2Q9Y320 296 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 DDTLA6NHG4 134 aaPredicted RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 PPP6R2O75170 966 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 SCG2P13521 617 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 USP14P54578 494 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 UBE2HP62256 183 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 KIF23Q02241 960 aaPredicted RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 RILPL1Q5EBL4 403 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 CEP95Q96GE4 821 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.29□□□□□ -1.08
NUP43-201ENST00000340413 ZNF219Q9P2Y4 722 aaPredicted RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 A0A1W2PQ27 194 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 A0A1W2PQ64 194 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 A0A1W2PQD8 194 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 AKR1B1P15121 316 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 CAP2P40123 477 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 SEMA3FQ13275 785 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 KCNG4Q8TDN1 519 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 TCEANC2Q96MN5 208 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 PYM1Q9BRP8 204 aaKnown RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 LRRC2Q9BYS8 371 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 PDHBP11177 359 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 NCLP19338 710 aaKnown RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 PICALMQ13492 652 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 COL9A3Q14050 684 aaPredicted RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 PKN1Q16512 942 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 MICU3Q86XE3 530 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 JMYQ8N9B5 988 aa8.29□□□□□ -1.08
NUP43-201ENST00000340413 RRP36Q96EU6 259 aaKnown RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
NUP43-201ENST00000340413 LAD1O00515 517 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 JAK2O60674 1132 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 PNMA8AQ86V59 439 aaPredicted RBP8.28□□□□□ -1.08
NUP43-201ENST00000340413 LMBRD1Q9NUN5 540 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 BARHL2Q9NY43 387 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 PHF20L1A8MW92 1017 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 GUCY1A2P33402 732 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 KRT40Q6A162 431 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
NUP43-201ENST00000340413 CHST3Q7LGC8 479 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 ZNF579Q8NAF0 562 aaKnown RBP8.28□□□□□ -1.08
NUP43-201ENST00000340413 KIAA1683Q9H0B3 1180 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 ZBTB21Q9ULJ3 1066 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 RABGAP1Q9Y3P9 1069 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 GNA11P29992 359 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 KRT2P35908 639 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 FKBP1BP68106 108 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 CCT2P78371 535 aaKnown RBP8.28□□□□□ -1.08
NUP43-201ENST00000340413 STK3Q13188 491 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 MOXD1Q6UVY6 613 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 NKX2-3Q8TAU0 364 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 ZMYND12Q9H0C1 365 aa8.28□□□□□ -1.08
NUP43-201ENST00000340413 NOL7Q9UMY1 257 aaKnown RBP8.28□□□□□ -1.08
NUP43-201ENST00000340413 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 C19orf81C9J6K1 198 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
NUP43-201ENST00000340413 ICA1Q05084 483 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 CDC37L1Q7L3B6 337 aa8.27□□□□□ -1.09
NUP43-201ENST00000340413 SRBD1Q8N5C6 995 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms