RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PDE4BQ07343 736 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 ZNF784Q8NCA9 323 aaPredicted RBP17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 BICD2Q8TD16 824 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 CSRNP1Q96S65 589 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 RBSNQ9H1K0 784 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 PI4KBQ9UBF8 816 aa17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
TUBB4B-201ENST00000340384 TRAF5O00463 557 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 IFNAR1P17181 557 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 ADD1P35611 737 aaKnown RBP17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 GUCY1B3Q02153 619 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 RAB11FIP4Q86YS3 637 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 SULF1Q8IWU6 871 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 EHD4Q9H223 541 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 FZD1Q9UP38 647 aa17.58■□□□□ 0.41
TUBB4B-201ENST00000340384 TNKSO95271 1327 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 PRDM1O75626 825 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 FMNL1O95466 1100 aaPredicted RBP17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 SHMT1P34896 483 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 MIGA2Q7L4E1 593 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 SERPINB13Q9UIV8 391 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 PPP2R3BQ9Y5P8 575 aa17.58■□□□□ 0.4
TUBB4B-201ENST00000340384 ITGBL1O95965 494 aaPredicted RBP17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 CDC27P30260 824 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 CDK8P49336 464 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 JAG1P78504 1218 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 NTRK3Q16288 839 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 CATIPQ7Z7H3 387 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 RBM28Q9NW13 759 aaKnown RBP17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 RTEL1Q9NZ71 1219 aa17.57■□□□□ 0.4
TUBB4B-201ENST00000340384 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 SEC23AQ15436 765 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 SHROOM1Q2M3G4 852 aaPredicted RBP17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 UVSSAQ2YD98 709 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 CCDC178Q5BJE1 867 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 IFIT1BQ5T764 474 aaKnown RBP17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 CDCA5Q96FF9 252 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
TUBB4B-201ENST00000340384 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 TBC1D12O60347 775 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 YEATS4O95619 227 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 HLA-DOAP06340 250 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 RXRAP19793 462 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 SAFBQ15424 915 aaKnown RBP eCLIP17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 TATDN1Q6P1N9 297 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 CCDC144CPQ8IYA2 1237 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 FANCBQ8NB91 859 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 KCNG4Q8TDN1 519 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 PPP1R9BQ96SB3 815 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 ZNF287Q9HBT7 754 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
TUBB4B-201ENST00000340384 DDAH1O94760 285 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 DEXIO95424 95 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 RASA1P20936 1047 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 CCDC73Q6ZRK6 1079 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 USP28Q96RU2 1077 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 TNMDQ9H2S6 317 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 FAM217BQ9NTX9 383 aaPredicted RBP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 CTAGE5O15320 804 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 PPFIA3O75145 1194 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 XBP1P17861 261 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 STK38Q15208 465 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 SF3A1Q15459 793 aaKnown RBP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 MYSM1Q5VVJ2 828 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 KRT40Q6A162 431 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 PHKBQ93100 1093 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
TUBB4B-201ENST00000340384 MYH6P13533 1939 aa17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 LIG1P18858 919 aa17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 CEBPZQ03701 1054 aaKnown RBP17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 RNF26Q9BY78 433 aaPredicted RBP17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 DACT1Q9NYF0 836 aa17.53■□□□□ 0.4
TUBB4B-201ENST00000340384 ME1P48163 572 aa17.52■□□□□ 0.4
TUBB4B-201ENST00000340384 FAM47AQ5JRC9 791 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms