RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 RBM17Q96I25 401 aaKnown RBP12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GSDMAQ96QA5 445 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CSRNP2Q9H175 543 aa12.25□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TSPY2A6NKD2 308 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 NRDCO43847 1150 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SMC2O95347 1197 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ST5P78524 1137 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MCM9Q9NXL9 1143 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 IFNKQ9P0W0 207 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 POLR2DO15514 142 aaKnown RBP12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CCP110O43303 1012 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ORC2Q13416 577 aaPredicted RBP12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 VSTM4Q8IW00 320 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 A0A087WWV3 80 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GRIN1Q05586 938 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 C16orf86Q6ZW13 317 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CMTR1Q8N1G2 835 aaKnown RBP12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CD209Q9NNX6 404 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ANKIB1Q9P2G1 1089 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SERTAD1Q9UHV2 236 aa12.24□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SNED1Q8TER0 1413 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MYO3BQ8WXR4 1341 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 LAD1O00515 517 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PRDM1O75626 825 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PLCD1P51178 756 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 HSP90AA2PQ14568 343 aaPredicted RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CCDC148Q8NFR7 591 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SPZ1Q9BXG8 430 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MYH1P12882 1939 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PALM3A6NDB9 673 aaPredicted RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 BIN1O00499 593 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SFPQP23246 707 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 LONP1P36776 959 aaKnown RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 E2F4Q16254 413 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 RPGRQ92834 1020 aaKnown RBP12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ANKRD31Q8N7Z5 1873 aa12.23□□□□□ -0.45
TRAF3IP2-201ENST00000340026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 hCG_1984214I3L0E3 225 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MYL1P05976 194 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CYP2D6P10635 497 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TNNT1P13805 278 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 USP5P45974 858 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GPSM2P81274 684 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 TFAP4Q01664 338 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 DPYDQ12882 1025 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SH3RF3Q8TEJ3 882 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 MAD2L2Q9UI95 211 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 UBASH3AP57075 661 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 C4orf32Q8N8J7 132 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 NEDD1Q8NHV4 660 aa12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 GREB1LQ9C091 1923 aaPredicted RBP12.22□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SERPINB2P05120 415 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 PRPHP41219 470 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 FILIP1Q7Z7B0 1213 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 BLIDQ8IZY5 108 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 AFF2P51816 1311 aa12.21□□□□□ -0.45
TRAF3IP2-201ENST00000340026 RIOK3O14730 519 aaKnown RBP12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RASA1P20936 1047 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 LMOD1P29536 600 aaPredicted RBP12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 CUL4BQ13620 913 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TMC6Q7Z403 805 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SP8Q8IXZ3 490 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ANKRD7Q92527 254 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PAGE5Q96GU1 130 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 BARHL2Q9NY43 387 aa12.21□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NMT2O60551 498 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 RHBDL3P58872 404 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 NLRP5P59047 1200 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 TPD52L1Q16890 204 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 IQUBQ8NA54 791 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 BRWD3Q6RI45 1802 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ESYT2A0FGR8 921 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ATP1A3P13637 1013 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PTGDRQ13258 359 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
TRAF3IP2-201ENST00000340026 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms