RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ADGRL3Q9HAR2 1447 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 MBD4O95243 580 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 CDC25AP30304 524 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ADAM9Q13443 819 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 TAF11Q15544 211 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 CLTCQ00610 1675 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 MROH7-TTC4A0A0A0MT08 1334 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.68
PTCHD4-201ENST00000339488 NPATQ14207 1427 aa10.77□□□□□ -0.68
PTCHD4-201ENST00000339488 FOXN1O15353 648 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 GNAQP50148 359 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 IFFO1Q0D2I5 559 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 HOOK3Q86VS8 718 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PSMB7Q99436 277 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM184BQ9ULE4 1060 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 AKR1B15C9JRZ8 316 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SLC27A2O14975 620 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 HSF2BPO75031 334 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 COBLO75128 1261 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PARP1P09874 1014 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CYP11B2P19099 503 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 STK38Q15208 465 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A2Q5SQ80 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A1Q5TYW2 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A3Q5VUR7 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SAPCD2Q86UD0 394 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CNTROBQ8N137 903 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SEC16BQ96JE7 1060 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC43Q96MW1 224 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SAMSN1Q9NSI8 373 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 GJB4Q9NTQ9 266 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 KDRP35968 1356 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NRXN1Q9ULB1 1477 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 CREB3O43889 395 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 GNAI2P04899 355 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 MDH1P40925 334 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 KCNJ2P63252 427 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 Q4G0T1 1027 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC63Q8NA47 563 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RANBP17Q9H2T7 1088 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.76□□□□□ -0.696e-11■■■□□ 16.5
PTCHD4-201ENST00000339488 WDR35Q9P2L0 1181 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 ESYT3A0FGR9 886 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 SASH1O94885 1247 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 PFKFB1P16118 471 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RFC5P40937 340 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LONP2Q86WA8 852 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 KIF2BQ8N4N8 673 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRC1Q9BTT6 524 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRD1A4D1F6 860 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 RASSF10A6NK89 507 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CASP14P31944 242 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC170Q8IYT3 715 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 IQCGQ9H095 443 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 STK38LQ9Y2H1 464 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SBNO2Q9Y2G9 1366 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ZSCAN5CA6NGD5 496 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 BPIFB4P59827 614 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ERVK-24P63145 666 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 DRP2Q13474 957 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 FBXO31Q5XUX0 539 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ANO7Q6IWH7 933 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 MAIP1Q8WWC4 291 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TBC1D7Q9P0N9 293 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms