RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ADGRL3Q9HAR2 1447 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 MBD4O95243 580 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 CDC25AP30304 524 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ADAM9Q13443 819 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 TAF11Q15544 211 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 CLTCQ00610 1675 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 MROH7-TTC4A0A0A0MT08 1334 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.68
PTCHD4-201ENST00000339488 NPATQ14207 1427 aa10.77□□□□□ -0.68
PTCHD4-201ENST00000339488 FOXN1O15353 648 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 MARCKSP29966 332 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 GNAQP50148 359 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 IFFO1Q0D2I5 559 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 HOOK3Q86VS8 718 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PSMB7Q99436 277 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM184BQ9ULE4 1060 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 BZW2Q9Y6E2 419 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 LMTK2Q8IWU2 1503 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PHF20L1A8MW92 1017 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 AKR1B15C9JRZ8 316 aaPredicted RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SLC27A2O14975 620 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 HSF2BPO75031 334 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 COBLO75128 1261 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 PARP1P09874 1014 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CYP11B2P19099 503 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 STK38Q15208 465 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A2Q5SQ80 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A1Q5TYW2 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 ANKRD20A3Q5VUR7 823 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SAPCD2Q86UD0 394 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CNTROBQ8N137 903 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SEC16BQ96JE7 1060 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC43Q96MW1 224 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 SAMSN1Q9NSI8 373 aaKnown RBP10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 GJB4Q9NTQ9 266 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 KDRP35968 1356 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.69
PTCHD4-201ENST00000339488 NRXN1Q9ULB1 1477 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 CREB3O43889 395 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 GNAI2P04899 355 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 MDH1P40925 334 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 KCNJ2P63252 427 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 Q4G0T1 1027 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC63Q8NA47 563 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RANBP17Q9H2T7 1088 aaKnown RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.76□□□□□ -0.696e-11■■■□□ 16.5
PTCHD4-201ENST00000339488 WDR35Q9P2L0 1181 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 ESYT3A0FGR9 886 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 ZNF233A6NK53 670 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 SASH1O94885 1247 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 PFKFB1P16118 471 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RFC5P40937 340 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NFE2L2Q16236 605 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LONP2Q86WA8 852 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 KIF2BQ8N4N8 673 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRC1Q9BTT6 524 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
PTCHD4-201ENST00000339488 SPHKAPQ2M3C7 1700 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 LRRD1A4D1F6 860 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 RASSF10A6NK89 507 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CASP14P31944 242 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CCDC170Q8IYT3 715 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 IQCGQ9H095 443 aaKnown RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 STK38LQ9Y2H1 464 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SBNO2Q9Y2G9 1366 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ZSCAN5CA6NGD5 496 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 BPIFB4P59827 614 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ERVK-24P63145 666 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 SLC39A6Q13433 755 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 DRP2Q13474 957 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 FBXO31Q5XUX0 539 aaPredicted RBP10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 ANO7Q6IWH7 933 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TRAPPC11Q7Z392 1133 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 MAIP1Q8WWC4 291 aa10.75□□□□□ -0.69
PTCHD4-201ENST00000339488 TBC1D7Q9P0N9 293 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms