RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 USP17L13C9JLJ4 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L11C9JVI0 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L18D6R9N7 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L22D6RA61 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L17D6RBQ6 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L19D6RCP7 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L20D6RJB6 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 RAD21O60216 631 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 ECM2O94769 699 aaPredicted RBP29.28■■■□□ 2.28
FAM78B-201ENST00000338353 USP17L24Q0WX57 530 aa29.28■■■□□ 2.28
FAM78B-201ENST00000338353 CTU1Q7Z7A3 348 aaKnown RBP29.28■■■□□ 2.28
FAM78B-201ENST00000338353 P2RX7Q99572 595 aaKnown RBP29.28■■■□□ 2.28
FAM78B-201ENST00000338353 RNF41Q9H4P4 317 aaPredicted RBP29.28■■■□□ 2.28
FAM78B-201ENST00000338353 BCRP11274 1271 aa29.27■■■□□ 2.28
FAM78B-201ENST00000338353 TNS4Q8IZW8 715 aa29.27■■■□□ 2.28
FAM78B-201ENST00000338353 ANKRD13CQ8N6S4 541 aa29.27■■■□□ 2.28
FAM78B-201ENST00000338353 PCP11498 1178 aaKnown RBP29.26■■■□□ 2.28
FAM78B-201ENST00000338353 CAP1Q01518 475 aa29.26■■■□□ 2.28
FAM78B-201ENST00000338353 KIAA1211Q6ZU35 1233 aa29.26■■■□□ 2.28
FAM78B-201ENST00000338353 LPAR1Q92633 364 aa29.26■■■□□ 2.28
FAM78B-201ENST00000338353 GOPCQ9HD26 462 aa29.26■■■□□ 2.28
FAM78B-201ENST00000338353 NEDD4P46934 1319 aa29.26■■■□□ 2.27
FAM78B-201ENST00000338353 NMT2O60551 498 aa29.26■■■□□ 2.27
FAM78B-201ENST00000338353 TTLL1O95922 423 aa29.26■■■□□ 2.27
FAM78B-201ENST00000338353 CATSPERGQ6ZRH7 1159 aa29.26■■■□□ 2.27
FAM78B-201ENST00000338353 U3KPZ7 1027 aaPredicted RBP29.26■■■□□ 2.27
FAM78B-201ENST00000338353 ZSWIM8A7E2V4 1837 aa29.25■■■□□ 2.27
FAM78B-201ENST00000338353 HERVK_113P62684 666 aa29.25■■■□□ 2.27
FAM78B-201ENST00000338353 LACTBP83111 547 aaPredicted RBP29.25■■■□□ 2.27
FAM78B-201ENST00000338353 TANGO6Q9C0B7 1094 aa29.25■■■□□ 2.27
FAM78B-201ENST00000338353 ARHGAP39Q9C0H5 1083 aa29.25■■■□□ 2.27
FAM78B-201ENST00000338353 IL17RBQ9NRM6 502 aa29.25■■■□□ 2.27
FAM78B-201ENST00000338353 REC8O95072 547 aa29.24■■■□□ 2.27
FAM78B-201ENST00000338353 GCLCP48506 637 aaPredicted RBP29.24■■■□□ 2.27
FAM78B-201ENST00000338353 KIF22Q14807 665 aa29.24■■■□□ 2.27
FAM78B-201ENST00000338353 NKX2-3Q8TAU0 364 aa29.24■■■□□ 2.27
FAM78B-201ENST00000338353 TRIM17Q9Y577 477 aa29.24■■■□□ 2.27
FAM78B-201ENST00000338353 LRRC47Q8N1G4 583 aaKnown RBP29.23■■■□□ 2.27
FAM78B-201ENST00000338353 MAP4K1Q92918 833 aa29.23■■■□□ 2.27
FAM78B-201ENST00000338353 STX8Q9UNK0 236 aa29.23■■■□□ 2.27
FAM78B-201ENST00000338353 MKL1Q969V6 931 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 MCOLN1Q9GZU1 580 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 LSG1Q9H089 658 aaKnown RBP29.22■■■□□ 2.27
FAM78B-201ENST00000338353 EFCC1Q9HA90 598 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 UPF2Q9HAU5 1272 aaKnown RBP29.22■■■□□ 2.27
FAM78B-201ENST00000338353 ANO2Q9NQ90 1003 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 WDR46O15213 610 aaKnown RBP29.22■■■□□ 2.27
FAM78B-201ENST00000338353 PEX10O60683 326 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 OTOP1Q7RTM1 612 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 ESR2Q92731 530 aa29.22■■■□□ 2.27
FAM78B-201ENST00000338353 RBM8AQ9Y5S9 174 aaKnown RBP29.22■■■□□ 2.27
FAM78B-201ENST00000338353 F5H6K3 240 aa29.21■■■□□ 2.27
FAM78B-201ENST00000338353 KLRC3Q07444 240 aa29.21■■■□□ 2.27
FAM78B-201ENST00000338353 FAM110CQ1W6H9 321 aa29.21■■■□□ 2.27
FAM78B-201ENST00000338353 B4E1Z4 1266 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 NDUFB10O96000 172 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 CYP21A2P08686 494 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 CTGFP29279 349 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 PSMC4P43686 418 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 PPP4R3BQ5MIZ7 849 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 PAGR1Q9BTK6 254 aa29.2■■■□□ 2.26
FAM78B-201ENST00000338353 KDM4AO75164 1064 aa29.19■■■□□ 2.26
FAM78B-201ENST00000338353 ARHGEF6Q15052 776 aa29.19■■■□□ 2.26
FAM78B-201ENST00000338353 FAM83BQ5T0W9 1011 aa29.19■■■□□ 2.26
FAM78B-201ENST00000338353 SAMD1Q6SPF0 538 aaPredicted RBP29.19■■■□□ 2.26
FAM78B-201ENST00000338353 NUP88Q99567 741 aaPredicted RBP29.19■■■□□ 2.26
FAM78B-201ENST00000338353 TXNRD2Q9NNW7 524 aa29.19■■■□□ 2.26
FAM78B-201ENST00000338353 FLOT1O75955 427 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 COG2Q14746 738 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 POTEEQ6S8J3 1075 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 RBPJLQ9UBG7 517 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 SPDYE16A6NNV3 312 aaPredicted RBP29.18■■■□□ 2.26
FAM78B-201ENST00000338353 MGAMO43451 1857 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 EPB41L2O43491 1005 aaKnown RBP29.18■■■□□ 2.26
FAM78B-201ENST00000338353 FMNL1O95466 1100 aaPredicted RBP29.18■■■□□ 2.26
FAM78B-201ENST00000338353 GTF3C2Q8WUA4 911 aaPredicted RBP29.18■■■□□ 2.26
FAM78B-201ENST00000338353 TRIM47Q96LD4 638 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 ZKSCAN3Q9BRR0 538 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 KRT23Q9C075 422 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 TCP11L1Q9NUJ3 509 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 SYNPO2Q9UMS6 1093 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 TAF6LQ9Y6J9 622 aa29.18■■■□□ 2.26
FAM78B-201ENST00000338353 RLFQ13129 1914 aa29.17■■■□□ 2.26
FAM78B-201ENST00000338353 CHMP4CQ96CF2 233 aa29.17■■■□□ 2.26
FAM78B-201ENST00000338353 CNNM2Q9H8M5 875 aa29.17■■■□□ 2.26
FAM78B-201ENST00000338353 MORF4L1Q9UBU8 362 aa29.17■■■□□ 2.26
FAM78B-201ENST00000338353 PKN2Q16513 984 aaKnown RBP29.16■■■□□ 2.26
FAM78B-201ENST00000338353 GMCL1P1Q8NEA9 526 aa29.16■■■□□ 2.26
FAM78B-201ENST00000338353 GPRC5AQ8NFJ5 357 aa29.16■■■□□ 2.26
FAM78B-201ENST00000338353 TSHZ2Q9NRE2 1034 aa29.16■■■□□ 2.26
FAM78B-201ENST00000338353 FBXO28Q9NVF7 368 aa29.16■■■□□ 2.26
FAM78B-201ENST00000338353 HOXC10Q9NYD6 342 aa29.16■■■□□ 2.26
FAM78B-201ENST00000338353 NOVP48745 357 aa29.15■■■□□ 2.26
FAM78B-201ENST00000338353 FCGRTP55899 365 aa29.15■■■□□ 2.26
FAM78B-201ENST00000338353 SLFN13Q68D06 897 aa29.15■■■□□ 2.26
FAM78B-201ENST00000338353 ZSWIM5Q9P217 1185 aa29.15■■■□□ 2.26
FAM78B-201ENST00000338353 PARP14Q460N5 1801 aa29.15■■■□□ 2.26
FAM78B-201ENST00000338353 ERVK-9P63128 1117 aa29.14■■■□□ 2.26
FAM78B-201ENST00000338353 ERVK-24P63145 666 aa29.14■■■□□ 2.26
FAM78B-201ENST00000338353 LBX2Q6XYB7 198 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms