RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 IQCB1Q15051 598 aa6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 RILPL1Q5EBL4 403 aa6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 C2CD5Q86YS7 1000 aa6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 SYAP1Q96A49 352 aaPredicted RBP6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 GRPEL1Q9HAV7 217 aa6.23□□□□□ -1.41
PRPF4B-201ENST00000337659 RPTORQ8N122 1335 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 H0YIN7 160 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 CYTH3O43739 400 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 ECE2O60344 883 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 KDM4AO75164 1064 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 TMEM67Q5HYA8 995 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 KRT40Q6A162 431 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 RALYLQ86SE5 291 aaKnown RBP6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 FOXP4Q8IVH2 680 aaPredicted RBP6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 C12orf42Q96LP6 360 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 MAGEF1Q9HAY2 307 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 ADAMTS5Q9UNA0 930 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 COL4A4P53420 1690 aaPredicted RBP6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 PHF20L1A8MW92 1017 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 USP17L12C9JPN9 530 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 USP17L21D6R901 530 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 PLCD1P51178 756 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 TRDNQ13061 729 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 RTN1Q16799 776 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 PLA2G4DQ86XP0 818 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 TRIML1Q8N9V2 468 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 TEPSINQ96N21 525 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 HSD3B7Q9H2F3 369 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 TFCP2L1Q9NZI6 479 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 SPDYE2BA6NHP3 402 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 SPDYE6P0CI01 402 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 EHHADHQ08426 723 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 SDR42E1Q8WUS8 393 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 KLRG1Q96E93 195 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 PLXNA1Q9UIW2 1896 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 IKBKBO14920 756 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 CYP3A4P08684 503 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 CRKP46108 304 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 ANO1Q5XXA6 986 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 MCTP1Q6DN14 999 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 B3GNT9Q6UX72 402 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 USP28Q96RU2 1077 aa6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 MAP3K20Q9NYL2 800 aaKnown RBP6.22□□□□□ -1.41
PRPF4B-201ENST00000337659 MUTP22033 750 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 CCDC173Q0VFZ6 552 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 PPP4R3AQ6IN85 833 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 DPP8Q6V1X1 898 aaPredicted RBP6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 VPS37DQ86XT2 251 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 FERMT2Q96AC1 680 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 MTMR9Q96QG7 549 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 PYM1Q9BRP8 204 aaKnown RBP6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 SLC12A7Q9Y666 1083 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 MRVI1Q9Y6F6 885 aa6.21□□□□□ -1.41
PRPF4B-201ENST00000337659 GOLGA8AA7E2F4 631 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 ACTN4O43707 911 aaKnown RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 PDHBP11177 359 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 EVX2Q03828 476 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 FAM151AQ8WW52 585 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 CCDC85AQ96PX6 553 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 PRDM10Q9NQV6 1147 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 RNF216Q9NWF9 866 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 PCDHA7Q9UN72 937 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 SMIM22K7EJ46 135 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 NFKBIEO00221 500 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 ZBTB7AO95365 584 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 SCG2P13521 617 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 CIITAP33076 1130 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 MFSD14BQ5SR56 506 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 SHC4Q6S5L8 630 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 TEKT1Q969V4 418 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 TMEM47Q9BQJ4 181 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 GTPBP4Q9BZE4 634 aaKnown RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 GLT8D2Q9H1C3 349 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 ORC3Q9UBD5 711 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 PCDHA4Q9UN74 947 aa6.21□□□□□ -1.42
PRPF4B-201ENST00000337659 ATP2A1O14983 1001 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 KIF5BP33176 963 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 TDO2P48775 406 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 ZNF543Q08ER8 600 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 IQCA1Q86XH1 822 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 NLGN2Q8NFZ4 835 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 RAI14Q9P0K7 980 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 DEKP35659 375 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 FXR2P51116 673 aaKnown RBP eCLIP6.2□□□□□ -1.428e-7■■□□□ 12.2
PRPF4B-201ENST00000337659 MAP3K11Q16584 847 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 DZIP1Q86YF9 867 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 TTLL6Q8N841 843 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 CCSER1Q9C0I3 900 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 RBSNQ9H1K0 784 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 CUEDC2Q9H467 287 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 ATP8B3O60423 1300 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 MYPNQ86TC9 1320 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 RALGAPA2Q2PPJ7 1873 aa6.2□□□□□ -1.42
PRPF4B-201ENST00000337659 IFIT3O14879 490 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms