RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ERO1AQ96HE7 468 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 FAM81BQ96LP2 452 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 MRPL40Q9NQ50 206 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 EVCP57679 992 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 LRRC36Q1X8D7 754 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 CAPRIN2Q6IMN6 1127 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 GID8Q9NWU2 228 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 MPP6Q9NZW5 540 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 SETD5Q9C0A6 1442 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 B4DLN1 442 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 RASGRF2O14827 1237 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 STX19Q8N4C7 294 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 GTF3C6Q969F1 213 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 VPS37BQ9H9H4 285 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ABCF3Q9NUQ8 709 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM64A6NGJ6 449 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM64BA6NI03 449 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 POTEMA6NI47 508 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 CWF19L2Q2TBE0 894 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 POTEHQ6S545 545 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 POTEGQ6S5H5 508 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 NANOGNBQ7Z5D8 188 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 SKAP1Q86WV1 359 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 LRRC49Q8IUZ0 686 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 CATSPER1Q8NEC5 780 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 SKA1Q96BD8 255 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM45Q9H8W5 580 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 FKBP14Q9NWM8 211 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 FBXO9Q9UK97 447 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 PAK3O75914 559 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANGPTL2Q9UKU9 493 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 TOM1O60784 492 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 DAB1O75553 588 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT3P12035 628 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 PSMA5P28066 241 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 EVA1CP58658 441 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 KLHL12Q53G59 568 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 POTEEQ6S8J3 1075 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF280BQ86YH2 543 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ERMNQ8TAM6 284 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 CNBD2Q96M20 576 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 HAUS7Q99871 368 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 IQGAP2Q13576 1575 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF608Q9ULD9 1512 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 HSPD1P10809 573 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 GCFC2P16383 781 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANO4Q32M45 955 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 FANCEQ9HB96 536 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 APPL1Q9UKG1 709 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ARHGAP42A6NI28 874 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 RAB11FIP3O75154 756 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 SESN2P58004 480 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 HYOU1Q9Y4L1 999 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 KIF21BO75037 1637 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 STAM2O75886 525 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT76Q01546 638 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CROCCP3Q8IVE0 287 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 TMTC2Q8N394 836 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 MYRIPQ8NFW9 859 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 FCHSD2O94868 740 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC157Q569K6 752 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 INTS3Q68E01 1043 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 RFT1Q96AA3 541 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 GNL3LQ9NVN8 582 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 STK26Q9P289 416 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CBY1Q9Y3M2 126 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 ATP5HO75947 161 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 LCA5LO95447 670 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 LRGUKQ96M69 825 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CNGA3Q16281 694 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 POLNQ7Z5Q5 900 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 MOV10L1Q9BXT6 1211 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 AATFQ9NY61 560 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 RNF207Q6ZRF8 634 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 COPS6Q7L5N1 327 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 TNMDQ9H2S6 317 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 RABL2AQ9UBK7 228 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 ORC6Q9Y5N6 252 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 STMND1H3BQB6 276 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 P4HA2O15460 535 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CDR2Q01850 454 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC183Q5T5S1 534 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 MYLK4Q86YV6 388 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 SYCE1Q8N0S2 351 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 CPXCR1Q8N123 301 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 MIA2Q96PC5 1412 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT20P35900 424 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 TSGA10Q9BZW7 698 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 NOP53Q9NZM5 478 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 RIPOR2Q9Y4F9 1068 aa6.67□□□□□ -1.34
CDC42BPA-201ENST00000334218 GOLGA8MH3BSY2 632 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 DR1Q01658 176 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 SPC25Q9HBM1 224 aa6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 PRG3Q9Y2Y8 225 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 EPB41P11171 864 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-201ENST00000334218 APBA1Q02410 837 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms