RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 XPO4Q9C0E2 1151 aaKnown RBP19.9■□□□□ 0.78
DDX28-201ENST00000332395 IFNKQ9P0W0 207 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 KLRG2A4D1S0 409 aaPredicted RBP19.9■□□□□ 0.78
DDX28-201ENST00000332395 USP17L3A6NCW0 530 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 USP17L4A6NCW7 530 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 WNT7AO00755 349 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 SMC2O95347 1197 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 NLRP5P59047 1200 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 MYL5Q02045 173 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 MFSD14BQ5SR56 506 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 OLFM4Q6UX06 510 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 USP17L1Q7RTZ2 530 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 ZNF444Q8N0Y2 327 aaPredicted RBP19.9■□□□□ 0.78
DDX28-201ENST00000332395 PDILTQ8N807 584 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 PRIMPOLQ96LW4 560 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 HSD3B7Q9H2F3 369 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 TCP11L1Q9NUJ3 509 aa19.9■□□□□ 0.78
DDX28-201ENST00000332395 VEGFAP15692 232 aaPredicted RBP19.89■□□□□ 0.77
DDX28-201ENST00000332395 LMOD1P29536 600 aaPredicted RBP19.89■□□□□ 0.77
DDX28-201ENST00000332395 TTC38Q5R3I4 469 aa19.89■□□□□ 0.77
DDX28-201ENST00000332395 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
DDX28-201ENST00000332395 ACTN4O43707 911 aaKnown RBP19.88■□□□□ 0.77
DDX28-201ENST00000332395 TXNRD1Q16881 649 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 FERMT2Q96AC1 680 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 LTBP1Q14766 1721 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 DDX60LQ5H9U9 1706 aaKnown RBP19.88■□□□□ 0.77
DDX28-201ENST00000332395 C6orf229H3BNL8 230 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 PRR29P0C7W0 189 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 RASA1P20936 1047 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 BMP6P22004 513 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 GRM4Q14833 912 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 ZNF174Q15697 407 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 NT5DC1Q5TFE4 455 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 KANK3Q6NY19 840 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 PROM2Q8N271 834 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 STAG2Q8N3U4 1231 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 MYRIPQ8NFW9 859 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 TBC1D22AQ8WUA7 517 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 MAN1B1Q9UKM7 699 aa19.88■□□□□ 0.77
DDX28-201ENST00000332395 PLCG2P16885 1265 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 OSBPL5Q9H0X9 879 aaPredicted RBP19.87■□□□□ 0.77
DDX28-201ENST00000332395 ZNF287Q9HBT7 754 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 IMPACTQ9P2X3 320 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 ATP1A3P13637 1013 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 SARSP49591 514 aaKnown RBP19.87■□□□□ 0.77
DDX28-201ENST00000332395 GSDMDP57764 484 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 FANCCQ00597 558 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 PIK3AP1Q6ZUJ8 805 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 SLF2Q8IX21 1173 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 SMARCE1Q969G3 411 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 FAM163AQ96GL9 167 aaPredicted RBP19.87■□□□□ 0.77
DDX28-201ENST00000332395 EPSTI1Q96J88 318 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 MAD2L2Q9UI95 211 aa19.87■□□□□ 0.77
DDX28-201ENST00000332395 FLT1P17948 1338 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 PPEF1O14829 653 aaPredicted RBP19.86■□□□□ 0.77
DDX28-201ENST00000332395 TRAPPC10P48553 1259 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 GNAQP50148 359 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 TMC4Q7Z404 712 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 GRAMD1CQ8IYS0 662 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 STX8Q9UNK0 236 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 GAKO14976 1311 aa19.86■□□□□ 0.77
DDX28-201ENST00000332395 CALML3P27482 149 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 RHBDL3P58872 404 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 ATP2C1P98194 919 aaPredicted RBP19.85■□□□□ 0.77
DDX28-201ENST00000332395 C16orf86Q6ZW13 317 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 SYMPKQ92797 1274 aaKnown RBP19.85■□□□□ 0.77
DDX28-201ENST00000332395 TMEM47Q9BQJ4 181 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 SH3GLB2Q9NR46 395 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 SNED1Q8TER0 1413 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 A0A087X0B3 334 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 ADAMTS3O15072 1205 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 SKILP12757 684 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 CDK8P49336 464 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 CCZ1BP86790 482 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 CCZ1P86791 482 aaPredicted RBP19.85■□□□□ 0.77
DDX28-201ENST00000332395 PTGDRQ13258 359 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 GPKOWQ92917 476 aaPredicted RBP eCLIP19.85■□□□□ 0.77
DDX28-201ENST00000332395 DHX58Q96C10 678 aa19.85■□□□□ 0.77
DDX28-201ENST00000332395 FAM205AQ6ZU69 1335 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 ANKRD31Q8N7Z5 1873 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 MORC3Q14149 939 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 TMC6Q7Z403 805 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 TRIML1Q8N9V2 468 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 EYA3Q99504 573 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 BLIDQ8IZY5 108 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 MLKLQ8NB16 471 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 SPATA20Q8TB22 786 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 CCDC34Q96HJ3 373 aa19.84■□□□□ 0.77
DDX28-201ENST00000332395 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
DDX28-201ENST00000332395 VWA3AA6NCI4 1184 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 MYO1BO43795 1136 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 SLC35G1Q2M3R5 365 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 PCDHA4Q9UN74 947 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 MTMR7Q9Y216 660 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 ATP6V0A2Q9Y487 856 aa19.83■□□□□ 0.77
DDX28-201ENST00000332395 CYTH3O43739 400 aa19.83■□□□□ 0.76
DDX28-201ENST00000332395 SLFN14P0C7P3 912 aa19.83■□□□□ 0.76
DDX28-201ENST00000332395 HMGB2P26583 209 aaKnown RBP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms