RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ARID4AP29374 1257 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 RBM5P52756 815 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG1-201ENST00000330588 LBX1P52954 281 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 KIF23Q02241 960 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 RASA3Q14644 834 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 SPTY2D1Q68D10 685 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 CCDC102BQ68D86 513 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 DLK2Q6UY11 383 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 ZNF512BQ96KM6 892 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 SIL1Q9H173 461 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 PA2G4Q9UQ80 394 aaKnown RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 COG6Q9Y2V7 657 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 GAKO14976 1311 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 OTOFQ9HC10 1997 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 A0A1B0GUL7 405 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 MANSC4A6NHS7 340 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 GPR37L1O60883 481 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 LDHBP07195 334 aaKnown RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 CHAF1AQ13111 956 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMG1-201ENST00000330588 APOBEC3HQ6NTF7 200 aaKnown RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 ANKRD13AQ8IZ07 590 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 TEPSINQ96N21 525 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 CNTNAP3BQ96NU0 1288 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 CSRNP1Q96S65 589 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
SMG1-201ENST00000330588 TDRD3Q9H7E2 651 aaKnown RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 COL2A1P02458 1487 aaPredicted RBP7.8□□□□□ -1.16
SMG1-201ENST00000330588 MAST2Q6P0Q8 1798 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 PNMA6EA0A0J9YXQ4 647 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 CLRN2A0PK11 232 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 ESPNB1AK53 854 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 UBE2Q2LH0YL09 131 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 UQCRFS1P1P0C7P4 283 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 PHKA1P46020 1223 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 TFCP2Q12800 502 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 COL25A1Q9BXS0 654 aaPredicted RBP7.79□□□□□ -1.16
SMG1-201ENST00000330588 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 VEZTQ9HBM0 779 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 RNF186Q9NXI6 227 aa7.79□□□□□ -1.16
SMG1-201ENST00000330588 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
SMG1-201ENST00000330588 IQSEC3Q9UPP2 1182 aaPredicted RBP7.79□□□□□ -1.16
SMG1-201ENST00000330588 RFX7Q2KHR2 1363 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 A6NJR5 290 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 LILRA1O75019 489 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 USP2O75604 605 aaPredicted RBP7.78□□□□□ -1.16
SMG1-201ENST00000330588 RLBP1P12271 317 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 GRM1Q13255 1194 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 RASGRF1Q13972 1273 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 GRIK5Q16478 980 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 HSP90AB4PQ58FF6 505 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 RNFT1Q5M7Z0 435 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 NBPF12Q5TAG4 269 aaPredicted RBP7.78□□□□□ -1.16
SMG1-201ENST00000330588 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 ERC1Q8IUD2 1116 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 ITPRIPQ8IWB1 547 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 KDF1Q8NAX2 398 aaPredicted RBP7.78□□□□□ -1.16
SMG1-201ENST00000330588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG1-201ENST00000330588 RNF217Q8TC41 542 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 FAM151AQ8WW52 585 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 XAGE2Q96GT9 111 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
SMG1-201ENST00000330588 IDI2Q9BXS1 227 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 ZCCHC17Q9NP64 241 aaKnown RBP7.78□□□□□ -1.16
SMG1-201ENST00000330588 DDX19BQ9UMR2 479 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 TNNQ9UQP3 1299 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 PCDHAC2Q9Y5I4 1007 aa7.78□□□□□ -1.16
SMG1-201ENST00000330588 AOX1Q06278 1338 aa7.77□□□□□ -1.16
SMG1-201ENST00000330588 ENTPD3O75355 529 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 LDHCP07864 332 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 PRDX5P30044 214 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 GSTO1P78417 241 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 RELBQ01201 579 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 PDE3AQ14432 1141 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 PRAMEF18Q5VWM3 479 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 MOB2Q70IA6 237 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 CERS3Q8IU89 383 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 RPAP2Q8IXW5 612 aaPredicted RBP7.77□□□□□ -1.17
SMG1-201ENST00000330588 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.17
SMG1-201ENST00000330588 WNK4Q96J92 1243 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 ZIC5Q96T25 663 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 TMPRSS4Q9NRS4 437 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 MYH2Q9UKX2 1941 aa7.77□□□□□ -1.17
SMG1-201ENST00000330588 ADH1AP07327 375 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 SLURP2P0DP57 97 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 ADORA1P30542 326 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 TIMM10P62072 90 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 PKN2Q16513 984 aaKnown RBP7.76□□□□□ -1.17
SMG1-201ENST00000330588 TNNI3KQ59H18 835 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 OTUD7BQ6GQQ9 843 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 CEP85Q6P2H3 762 aa7.76□□□□□ -1.17
SMG1-201ENST00000330588 SPATA5Q8NB90 893 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms