RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 SH3BP5LQ7L8J4 393 aa23.38■■□□□ 1.33
RIPPLY3-201ENST00000329553 NOSTRINQ8IVI9 506 aa23.38■■□□□ 1.33
RIPPLY3-201ENST00000329553 PLIN4Q96Q06 1357 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 PSDA5PKW4 1024 aaPredicted RBP23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 NPM3O75607 178 aaKnown RBP23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 TOP1P11387 765 aaKnown RBP23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 ME1P48163 572 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 NIM1KQ8IY84 436 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 EHD4Q9H223 541 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 DHX36Q9H2U1 1008 aaKnown RBP23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 FOXP1Q9H334 677 aaPredicted RBP23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 DACT1Q9NYF0 836 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 PCDHA7Q9UN72 937 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 XBP1P17861 261 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 OXER1Q8TDS5 423 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 PIBF1Q8WXW3 757 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 MTMR4Q9NYA4 1195 aa23.37■■□□□ 1.33
RIPPLY3-201ENST00000329553 MYH8P13535 1937 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 BRCA1P38398 1863 aaKnown RBP23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 IGKV6D-41A0A0C4DH26 115 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 PALM3A6NDB9 673 aaPredicted RBP23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 VEGFAP15692 232 aaPredicted RBP23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 GNAQP50148 359 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 NR5A1Q13285 461 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 PHF20Q9BVI0 1012 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 DNAJC18Q9H819 358 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 NR1I2O75469 434 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 SF3A1Q15459 793 aaKnown RBP23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 RASGRP2Q7LDG7 609 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 ZSCAN29Q8IWY8 852 aaPredicted RBP23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 PI4KBQ9UBF8 816 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 CD2APQ9Y5K6 639 aa23.36■■□□□ 1.33
RIPPLY3-201ENST00000329553 SPTLC2O15270 562 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 SCG2P13521 617 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 SLC35G1Q2M3R5 365 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 CCAR1Q8IX12 1150 aaKnown RBP23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 KCNG4Q8TDN1 519 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 TAOK3Q9H2K8 898 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 GOLGA8HP0CJ92 632 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 TERF1P54274 439 aa23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 PFKFB3Q16875 520 aaPredicted RBP23.35■■□□□ 1.33
RIPPLY3-201ENST00000329553 PTGER2P43116 358 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 CXCL9Q07325 125 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 SLC39A14Q15043 492 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 ADALQ6DHV7 355 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 FER1L6Q2WGJ9 1857 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 SIPA1L1O43166 1804 aa23.34■■□□□ 1.33
RIPPLY3-201ENST00000329553 FAM196BA6NMK8 535 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 CYTH3O43739 400 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 CLEC10AQ8IUN9 316 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 GOLPH3LQ9H4A5 285 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 HDAC9Q9UKV0 1011 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 SPDYE2BA6NHP3 402 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 NFKBIEO00221 500 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 SPDYE6P0CI01 402 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 TOB1P50616 345 aaPredicted RBP23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 PTPAQ15257 358 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 CAMK4Q16566 473 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 USP17L2Q6R6M4 530 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 OGFOD1Q8N543 542 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 NUP62CLQ9H1M0 184 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 DDX19AQ9NUU7 478 aaKnown RBP23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 BCS1LQ9Y276 419 aa23.33■■□□□ 1.33
RIPPLY3-201ENST00000329553 KLRF2D3W0D1 207 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 ENTPD3O75355 529 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 EIF6P56537 245 aaKnown RBP23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 NPY5RQ15761 445 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 PARP1P09874 1014 aaKnown RBP23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 DLGAP5Q15398 846 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 FOXP4Q8IVH2 680 aaPredicted RBP23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 CCDC17Q96LX7 622 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 FUCA2Q9BTY2 467 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 CLIP2Q9UDT6 1046 aa23.32■■□□□ 1.32
RIPPLY3-201ENST00000329553 MPHOSPH10O00566 681 aaKnown RBP23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 KRT2P35908 639 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 AGBL3Q8NEM8 1001 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 USP17L5A8MUK1 530 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 TTLL1O95922 423 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 MARCKSP29966 332 aaPredicted RBP23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 LRRC47Q8N1G4 583 aaKnown RBP23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 LZTS2Q9BRK4 669 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 CPVLQ9H3G5 476 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 CABP5Q9NP86 173 aa23.31■■□□□ 1.32
RIPPLY3-201ENST00000329553 A0A1W2PQ27 194 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 A0A1W2PQ64 194 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 A0A1W2PQD8 194 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 CLRN2A0PK11 232 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 SNW1Q13573 536 aaKnown RBP23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 AXDND1Q5T1B0 1012 aaPredicted RBP23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 FSIP1Q8NA03 581 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 JDP2Q8WYK2 163 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 CLSTN2Q9H4D0 955 aa23.3■■□□□ 1.32
RIPPLY3-201ENST00000329553 RILPL1Q5EBL4 403 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 EARS2Q5JPH6 523 aaKnown RBP23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 ENGASEQ8NFI3 743 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 ZNF70Q9UC06 446 aaPredicted RBP23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 ATRNL1Q5VV63 1379 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 TCP10L2B9ZVM9 353 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 PDHBP11177 359 aa23.29■■□□□ 1.32
RIPPLY3-201ENST00000329553 CERKLQ49MI3 558 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms