RNA–Protein interactions for RNA: ENST00000328024.10

RAB11B-201, Transcript of RAB11B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11B, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-201ENST00000328024 SEC24BO95487 1268 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 VCAM1P19320 739 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 TAF1CQ15572 869 aaPredicted RBP23.78■■□□□ 1.4
RAB11B-201ENST00000328024 RCSD1Q6JBY9 416 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 SPICE1Q8N0Z3 855 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 LRRC47Q8N1G4 583 aaKnown RBP23.78■■□□□ 1.4
RAB11B-201ENST00000328024 VCPKMTQ9H867 229 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 CNNM2Q9H8M5 875 aa23.78■■□□□ 1.4
RAB11B-201ENST00000328024 USP26Q9BXU7 913 aa23.77■■□□□ 1.4
RAB11B-201ENST00000328024 STX8Q9UNK0 236 aa23.77■■□□□ 1.4
RAB11B-201ENST00000328024 MYH4Q9Y623 1939 aa23.76■■□□□ 1.39
RAB11B-201ENST00000328024 HSPA8P11142 646 aaKnown RBP23.76■■□□□ 1.39
RAB11B-201ENST00000328024 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
RAB11B-201ENST00000328024 HSPA4P34932 840 aa23.76■■□□□ 1.39
RAB11B-201ENST00000328024 C8orf34Q49A92 452 aa23.76■■□□□ 1.39
RAB11B-201ENST00000328024 KCNB2Q92953 911 aa23.76■■□□□ 1.39
RAB11B-201ENST00000328024 SLC45A1Q9Y2W3 748 aa23.76■■□□□ 1.39
RAB11B-201ENST00000328024 MB21D2Q8IYB1 491 aaPredicted RBP23.75■■□□□ 1.39
RAB11B-201ENST00000328024 SH2D4AQ9H788 454 aa23.75■■□□□ 1.39
RAB11B-201ENST00000328024 F5H6K3 240 aa23.75■■□□□ 1.39
RAB11B-201ENST00000328024 KLRC3Q07444 240 aa23.75■■□□□ 1.39
RAB11B-201ENST00000328024 CHST3Q7LGC8 479 aa23.75■■□□□ 1.39
RAB11B-201ENST00000328024 NCOA7Q8NI08 942 aa23.75■■□□□ 1.39
RAB11B-201ENST00000328024 ASCC2Q9H1I8 757 aaPredicted RBP23.75■■□□□ 1.39
RAB11B-201ENST00000328024 ADGRA2Q96PE1 1338 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 ANTXR2P58335 489 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 ADCK5Q3MIX3 580 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 TSGA10IPQ3SY00 556 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 POTEEQ6S8J3 1075 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 TMEM47Q9BQJ4 181 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 RPAP3Q9H6T3 665 aaPredicted RBP23.74■■□□□ 1.39
RAB11B-201ENST00000328024 ZFYVE28Q9HCC9 887 aa23.74■■□□□ 1.39
RAB11B-201ENST00000328024 NDUFB10O96000 172 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 NT5C2P49902 561 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 TRDNQ13061 729 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 CATSPERGQ6ZRH7 1159 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 RASGRP2Q7LDG7 609 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 ZSCAN10Q96SZ4 725 aaPredicted RBP23.73■■□□□ 1.39
RAB11B-201ENST00000328024 NUP88Q99567 741 aaPredicted RBP23.73■■□□□ 1.39
RAB11B-201ENST00000328024 P2RX7Q99572 595 aaKnown RBP23.73■■□□□ 1.39
RAB11B-201ENST00000328024 RAD21O60216 631 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 TLR2O60603 784 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 RNF20Q5VTR2 975 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 ENAHQ8N8S7 591 aaPredicted RBP23.73■■□□□ 1.39
RAB11B-201ENST00000328024 LPAR1Q92633 364 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 CHMP4CQ96CF2 233 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 GOPCQ9HD26 462 aa23.73■■□□□ 1.39
RAB11B-201ENST00000328024 LBX1P52954 281 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 SEC23AQ15436 765 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 RALYLQ86SE5 291 aaKnown RBP23.72■■□□□ 1.39
RAB11B-201ENST00000328024 GMCL1P1Q8NEA9 526 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 TTC14Q96N46 770 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 SYNPO2Q9UMS6 1093 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 SNX14Q9Y5W7 946 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 TNKSO95271 1327 aa23.72■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L15C9J2P7 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L13C9JLJ4 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L11C9JVI0 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L18D6R9N7 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L22D6RA61 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L17D6RBQ6 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L19D6RCP7 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L20D6RJB6 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 EPB41L2O43491 1005 aaKnown RBP23.71■■□□□ 1.39
RAB11B-201ENST00000328024 CTCFP49711 727 aaPredicted RBP23.71■■□□□ 1.39
RAB11B-201ENST00000328024 USP17L24Q0WX57 530 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 IQCA1Q86XH1 822 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 DGKHQ86XP1 1220 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 ANKS1AQ92625 1134 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 PARK7Q99497 189 aaKnown RBP23.71■■□□□ 1.39
RAB11B-201ENST00000328024 CPA4Q9UI42 421 aa23.71■■□□□ 1.39
RAB11B-201ENST00000328024 GPR25O00155 361 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 PEX10O60683 326 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 TOP1P11387 765 aaKnown RBP23.7■■□□□ 1.39
RAB11B-201ENST00000328024 OSBPP22059 807 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 PABPC4Q13310 644 aaKnown RBP eCLIP23.7■■□□□ 1.391e-10■□□□□ 8.5
RAB11B-201ENST00000328024 FAM83BQ5T0W9 1011 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 C17orf99Q6UX52 265 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 SENP2Q9HC62 589 aa23.7■■□□□ 1.39
RAB11B-201ENST00000328024 WDR46O15213 610 aaKnown RBP23.7■■□□□ 1.38
RAB11B-201ENST00000328024 PPP4R3BQ5MIZ7 849 aa23.7■■□□□ 1.38
RAB11B-201ENST00000328024 SLFN13Q68D06 897 aa23.7■■□□□ 1.38
RAB11B-201ENST00000328024 GPHNQ9NQX3 736 aaPredicted RBP23.7■■□□□ 1.38
RAB11B-201ENST00000328024 RLFQ13129 1914 aa23.69■■□□□ 1.38
RAB11B-201ENST00000328024 IRX3P78415 501 aaPredicted RBP23.69■■□□□ 1.38
RAB11B-201ENST00000328024 FBXO28Q9NVF7 368 aa23.69■■□□□ 1.38
RAB11B-201ENST00000328024 PNMA3Q9UL41 463 aa23.69■■□□□ 1.38
RAB11B-201ENST00000328024 ZKSCAN1P17029 563 aaPredicted RBP23.68■■□□□ 1.38
RAB11B-201ENST00000328024 MCCP23508 829 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 HERVK_113P62684 666 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 CAP1Q01518 475 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 IGDCC4Q8TDY8 1250 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 ZNF296Q8WUU4 475 aaPredicted RBP23.68■■□□□ 1.38
RAB11B-201ENST00000328024 NEK1Q96PY6 1258 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 UBAC1Q9BSL1 405 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 TANGO6Q9C0B7 1094 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 MTMR7Q9Y216 660 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 BCRP11274 1271 aa23.68■■□□□ 1.38
RAB11B-201ENST00000328024 SMCR8Q8TEV9 937 aaPredicted RBP23.68■■□□□ 1.38
RAB11B-201ENST00000328024 IFIT3O14879 490 aaKnown RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms