RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 DDR1Q08345 913 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 SSRP1Q08945 709 aaKnown RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 SCARF1Q14162 830 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 TTC19Q6DKK2 380 aaPredicted RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 BANK1Q8NDB2 785 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 JAKMIP2Q96AA8 810 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 FER1L4A9Z1Z3 1794 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 B4E1Z4 1266 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 MYCNP04198 464 aaPredicted RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 GPTP24298 496 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 SGMS1Q86VZ5 419 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 RRP36Q96EU6 259 aaKnown RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 ZNF496Q96IT1 587 aaPredicted RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 GSDMAQ96QA5 445 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
CCDC60-201ENST00000327554 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
CCDC60-201ENST00000327554 ZNF185O15231 689 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 ADORA1P30542 326 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 NR5A1Q13285 461 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC60-201ENST00000327554 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 EP400NLQ6ZTU2 488 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 SND1Q7KZF4 910 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC60-201ENST00000327554 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 TMEM87BQ96K49 555 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 PUS3Q9BZE2 481 aaKnown RBP14.37□□□□□ -0.11
CCDC60-201ENST00000327554 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC60-201ENST00000327554 MYH6P13533 1939 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 KIF1AQ12756 1690 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 APPP05067 770 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 C2orf54Q08AI8 447 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 TTMPQ5BVD1 217 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 AMOTL1Q8IY63 956 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 STAG1Q8WVM7 1258 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 EPSTI1Q96J88 318 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
CCDC60-201ENST00000327554 TBX22Q9Y458 520 aa14.37□□□□□ -0.11
CCDC60-201ENST00000327554 AKAP11Q9UKA4 1901 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 EPB41P11171 864 aaKnown RBP14.36□□□□□ -0.11
CCDC60-201ENST00000327554 IFNAR1P17181 557 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 ZAP70P43403 619 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 ZNF662Q6ZS27 426 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 B4GALNT4Q76KP1 1039 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 ARL8AQ96BM9 186 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 GNL3LQ9NVN8 582 aaKnown RBP14.36□□□□□ -0.11
CCDC60-201ENST00000327554 LRP6O75581 1613 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 TTC26A0AVF1 554 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
CCDC60-201ENST00000327554 CIAO1O76071 339 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 SF3B2Q13435 895 aaKnown RBP14.36□□□□□ -0.11
CCDC60-201ENST00000327554 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 WASF1Q92558 559 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 HINFPQ9BQA5 517 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 SLC52A2Q9HAB3 445 aa14.36□□□□□ -0.11
CCDC60-201ENST00000327554 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 C21orf2O43822 256 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 PDCLQ13371 301 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TTF1Q15361 905 aaPredicted RBP14.35□□□□□ -0.11
CCDC60-201ENST00000327554 EZH2Q15910 746 aaKnown RBP14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TCP11X2Q5H9J9 407 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 PLBD2Q8NHP8 589 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 HDAC7Q8WUI4 952 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 DNAJC7Q99615 494 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 CEP131Q9UPN4 1083 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 NUP188Q5SRE5 1749 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 RCCD1A6NED2 376 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 OPA1O60313 960 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 A1BGP04217 495 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 SETQ01105 290 aaPredicted RBP14.35□□□□□ -0.11
CCDC60-201ENST00000327554 SPAG1Q07617 926 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TMEM67Q5HYA8 995 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 PI16Q6UXB8 463 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 MMGT1Q8N4V1 131 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 OTUD6BQ8N6M0 293 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TSEN2Q8NCE0 465 aaKnown RBP14.35□□□□□ -0.11
CCDC60-201ENST00000327554 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 AIDAQ96BJ3 306 aa14.35□□□□□ -0.11
CCDC60-201ENST00000327554 TACO1Q9BSH4 297 aaKnown RBP14.35□□□□□ -0.11
CCDC60-201ENST00000327554 NID2Q14112 1375 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 ZKSCAN4Q969J2 545 aaPredicted RBP14.34□□□□□ -0.11
CCDC60-201ENST00000327554 PAGR1Q9BTK6 254 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 LACRTQ9GZZ8 138 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 DMGDHQ9UI17 866 aaKnown RBP14.34□□□□□ -0.11
CCDC60-201ENST00000327554 RWDD2AQ9UIY3 292 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 LIFRP42702 1097 aa14.34□□□□□ -0.11
CCDC60-201ENST00000327554 SPATS2Q86XZ4 545 aaKnown RBP14.34□□□□□ -0.11
CCDC60-201ENST00000327554 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
CCDC60-201ENST00000327554 CD248Q9HCU0 757 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms