RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TTLL1O95922 423 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 MSNP26038 577 aaKnown RBP14.81□□□□□ -0.04
DDX39A-202ENST00000324340 GUCY1A2P33402 732 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
DDX39A-202ENST00000324340 GRM4Q14833 912 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 ABCB5Q2M3G0 1257 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
DDX39A-202ENST00000324340 NBPF11Q86T75 865 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 CCDC144CPQ8IYA2 1237 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 MKL1Q969V6 931 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 KANSL2Q9H9L4 492 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 NYAP2Q9P242 653 aa14.81□□□□□ -0.04
DDX39A-202ENST00000324340 WDR33Q9C0J8 1336 aaKnown RBP14.8□□□□□ -0.04
DDX39A-202ENST00000324340 MYH4Q9Y623 1939 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 GOLGA6L22H0YM25 854 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 DTNBO60941 627 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 KIF5BP33176 963 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 FUT2Q10981 343 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 TMTC3Q6ZXV5 915 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 USP50Q70EL3 339 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-202ENST00000324340 CTCFLQ8NI51 663 aaPredicted RBP14.8□□□□□ -0.04
DDX39A-202ENST00000324340 TNPO1Q92973 898 aaKnown RBP14.8□□□□□ -0.04
DDX39A-202ENST00000324340 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 GGA3Q9NZ52 723 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
DDX39A-202ENST00000324340 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 MPHOSPH10O00566 681 aaKnown RBP14.79□□□□□ -0.04
DDX39A-202ENST00000324340 FMNL1O95466 1100 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-202ENST00000324340 JAG1P78504 1218 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 SIAH1Q8IUQ4 282 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 FAM184AQ8NB25 1140 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 CABP5Q9NP86 173 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 ORC3Q9UBD5 711 aaPredicted RBP14.79□□□□□ -0.04
DDX39A-202ENST00000324340 SCAF8Q9UPN6 1271 aaKnown RBP14.79□□□□□ -0.04
DDX39A-202ENST00000324340 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
DDX39A-202ENST00000324340 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 PALM3A6NDB9 673 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 GDF11O95390 407 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 GH2P01242 217 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 ZSCAN22P10073 491 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 YY1P25490 414 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 CAP2P40123 477 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 GNAQP50148 359 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 SSRP1Q08945 709 aaKnown RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 SEPT2Q15019 361 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 SHROOM1Q2M3G4 852 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 MIGA2Q7L4E1 593 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 ZC3H15Q8WU90 426 aaKnown RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 RNF26Q9BY78 433 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 GINM1Q9NU53 330 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 CLIP2Q9UDT6 1046 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 MAD2L2Q9UI95 211 aa14.78□□□□□ -0.04
DDX39A-202ENST00000324340 NOL7Q9UMY1 257 aaKnown RBP14.78□□□□□ -0.04
DDX39A-202ENST00000324340 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 POTECB2RU33 542 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 PRPF3O43395 683 aaKnown RBP14.77□□□□□ -0.04
DDX39A-202ENST00000324340 PLEKHA8P1O95397 391 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 EEF2P13639 858 aaKnown RBP14.77□□□□□ -0.04
DDX39A-202ENST00000324340 SMARCA1P28370 1054 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 EPHX2P34913 555 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 ZNF445P59923 1031 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 ICA1Q05084 483 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 NBPF12Q5TAG4 269 aaPredicted RBP14.77□□□□□ -0.04
DDX39A-202ENST00000324340 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 TRIM22Q8IYM9 498 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 PHKBQ93100 1093 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.04
DDX39A-202ENST00000324340 CNTNAP5Q8WYK1 1306 aa14.77□□□□□ -0.05
DDX39A-202ENST00000324340 DEXIO95424 95 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 F13A1P00488 732 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 PDHBP11177 359 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
DDX39A-202ENST00000324340 KLHL40Q2TBA0 621 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 DCAF15Q66K64 600 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 SRBD1Q8N5C6 995 aaKnown RBP14.76□□□□□ -0.05
DDX39A-202ENST00000324340 WASF1Q92558 559 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 SLC26A6Q9BXS9 759 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 ZNF112Q9UJU3 913 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 SSC5DA1L4H1 1573 aa14.76□□□□□ -0.05
DDX39A-202ENST00000324340 POLR2AP24928 1970 aaKnown RBP14.76□□□□□ -0.05
DDX39A-202ENST00000324340 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 ASNSP08243 561 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
DDX39A-202ENST00000324340 ASPRV1Q53RT3 343 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 CMTR1Q8N1G2 835 aaKnown RBP14.75□□□□□ -0.05
DDX39A-202ENST00000324340 LRRC47Q8N1G4 583 aaKnown RBP14.75□□□□□ -0.05
DDX39A-202ENST00000324340 STAG2Q8N3U4 1231 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 GMCL1P1Q8NEA9 526 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 FBXO18Q8NFZ0 1043 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 DCPSQ96C86 337 aaKnown RBP14.75□□□□□ -0.05
DDX39A-202ENST00000324340 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
DDX39A-202ENST00000324340 MYH6P13533 1939 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 DOCK1Q14185 1865 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 PAPPA2Q9BXP8 1791 aa14.75□□□□□ -0.05
DDX39A-202ENST00000324340 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 847 ms