RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PTPREP23469 700 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 CCZ1BP86790 482 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 CCZ1P86791 482 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-201ENST00000323668 UTYO14607 1347 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 GOLGA6CA6NDK9 693 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 PRKAB2O43741 272 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 GOLGA6DP0CG33 693 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 RFC4P35249 363 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 TXKP42681 527 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 ARMCX5Q6P1M9 558 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 SMYD4Q8IYR2 804 aaPredicted RBP16.49■□□□□ 0.23
TCOF1-201ENST00000323668 GOLGA6AQ9NYA3 693 aa16.49■□□□□ 0.23
TCOF1-201ENST00000323668 GYG1P46976 350 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 FOXO4P98177 505 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 TTC31Q49AM3 519 aaPredicted RBP16.48■□□□□ 0.23
TCOF1-201ENST00000323668 C8orf74Q6P047 294 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 KRT25Q7Z3Z0 450 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 TTLL11Q8NHH1 800 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 GOLGA6BA6NDN3 693 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 CABP7Q86V35 215 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 PALLDQ8WX93 1383 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 RPN1P04843 607 aaKnown RBP16.48■□□□□ 0.23
TCOF1-201ENST00000323668 TBC1D10CQ8IV04 446 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 ARFGAP2Q8N6H7 521 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 TNNC1P63316 161 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
TCOF1-201ENST00000323668 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
TCOF1-201ENST00000323668 SOWAHDA6NJG2 315 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 AP5Z1O43299 807 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 GDAP1L1Q96MZ0 367 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 PANX2Q96RD6 677 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 TMEM232C9JQI7 657 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 CARD10Q9BWT7 1032 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 LRWD1Q9UFC0 647 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 OTUD6BQ8N6M0 293 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 DDAH1O94760 285 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
TCOF1-201ENST00000323668 KIAA0753Q2KHM9 967 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-201ENST00000323668 CYB5R4Q7L1T6 521 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 NOX5Q96PH1 765 aa16.47■□□□□ 0.23
TCOF1-201ENST00000323668 IFIH1Q9BYX4 1025 aaKnown RBP16.47■□□□□ 0.23
TCOF1-201ENST00000323668 GOLGA6L10A0A0M3HER8 536 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 TRAPPC10P48553 1259 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 HSPA2P54652 639 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 SND1Q7KZF4 910 aaKnown RBP eCLIP16.46■□□□□ 0.23
TCOF1-201ENST00000323668 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 LONP1P36776 959 aaKnown RBP16.46■□□□□ 0.23
TCOF1-201ENST00000323668 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 LCORLQ8N3X6 602 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 PSMB7Q99436 277 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 CHRNDQ07001 517 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 CCDC65Q8IXS2 484 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 GIMAP7Q8NHV1 300 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 EPSTI1Q96J88 318 aa16.46■□□□□ 0.23
TCOF1-201ENST00000323668 FAM207AQ9NSI2 230 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-201ENST00000323668 ARPP21Q9UBL0 812 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-201ENST00000323668 TMEM131LA2VDJ0 1609 aa16.46■□□□□ 0.22
TCOF1-201ENST00000323668 KIF28PB7ZC32 967 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 GCOM1H8Y6P7 765 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 COBLO75128 1261 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 PICALMQ13492 652 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 RBM43Q6ZSC3 357 aaKnown RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 LZTS2Q9BRK4 669 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 SAP30BPQ9UHR5 308 aaKnown RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 CEP170BQ9Y4F5 1589 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 NEFHP12036 1026 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 GTF2A1P52655 376 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 MAP2K1Q02750 393 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 ENGASEQ8NFI3 743 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 IQCDQ96DY2 449 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 MED4Q9NPJ6 270 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 KCNJ6P48051 423 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 RFX5P48382 616 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 C2CD5Q86YS7 1000 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 TEX11Q8IYF3 940 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 CDC27P30260 824 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 TNIP1Q15025 636 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 PDIA6Q15084 440 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 SEPT7Q16181 437 aaKnown RBP16.45■□□□□ 0.22
TCOF1-201ENST00000323668 TRIM58Q8NG06 486 aa16.45■□□□□ 0.22
TCOF1-201ENST00000323668 NBPF26B4DH59 902 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms