RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 KCNK3O14649 394 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 ANXA1P04083 346 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 AKAP4Q5JQC9 854 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 ARMC9Q7Z3E5 817 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 SPZ1Q9BXG8 430 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 JADE1Q6IE81 842 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 TTLL3Q9Y4R7 772 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 GSTA1P08263 222 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 GSTA2P09210 222 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 ARHGEF10LQ9HCE6 1279 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 ADKP55263 362 aaKnown RBP18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 MYCT1Q8N699 235 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 TTC4O95801 387 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 SP4Q02446 784 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 PPARDQ03181 441 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 NRBF2Q96F24 287 aa18.55■□□□□ 0.56
SMCHD1-201ENST00000320876 C8orf58Q8NAV2 365 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 CCDC197Q8NCU1 140 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 NT5C3AQ9H0P0 336 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 PASKQ96RG2 1323 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 APOEP02649 317 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 BBOF1Q8ND07 529 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 FAM207AQ9NSI2 230 aaPredicted RBP18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 RIMS2Q9UQ26 1411 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 CENPKQ9BS16 269 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 ZNF277Q9NRM2 450 aaPredicted RBP18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 STAM2O75886 525 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 NACA2Q9H009 215 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 SEPT10Q9P0V9 454 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 ADGRF5Q8IZF2 1346 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 FOXO3O43524 673 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 RNF8O76064 485 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 IL9RQ01113 521 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 KRT25Q7Z3Z0 450 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 CCDC124Q96CT7 223 aaKnown RBP18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 STAT1P42224 750 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 PDE11AQ9HCR9 933 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 RAB20Q9NX57 234 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 DENND2AQ9ULE3 1009 aa18.54■□□□□ 0.56
SMCHD1-201ENST00000320876 SART1O43290 800 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 PDCD7Q8N8D1 485 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 TXLNGQ9NUQ3 528 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 EXOC3O60645 756 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 HERC4Q5GLZ8 1057 aaPredicted RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 CDC37L1Q7L3B6 337 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 FBXO41Q8TF61 875 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 KCNG1Q9UIX4 513 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 SF3A3Q12874 501 aaKnown RBP eCLIP18.53■□□□□ 0.562e-6■■■■□ 26.1
SMCHD1-201ENST00000320876 OR8K1Q8NGG5 319 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 MORC4Q8TE76 937 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 RABGGTAQ92696 567 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 NIP7Q9Y221 180 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 SSH2Q76I76 1423 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 FRMD3A2A2Y4 597 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 EIF3CLB5ME19 914 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 MBD4O95243 580 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 EIF3CQ99613 913 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 PNOCQ13519 176 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 LSM14BQ9BX40 385 aaKnown RBP18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 PPP2R2CQ9Y2T4 447 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 PFDN6O15212 129 aa18.53■□□□□ 0.56
SMCHD1-201ENST00000320876 TRIM56Q9BRZ2 755 aaKnown RBP18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 SCOCQ9UIL1 159 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 B4E1Z4 1266 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 ADCY7P51828 1080 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 MORC3Q14149 939 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 MYO1AQ9UBC5 1043 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 RRP15Q9Y3B9 282 aaKnown RBP18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 TTC6Q86TZ1 520 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 MAPKBP1O60336 1514 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.56
SMCHD1-201ENST00000320876 ACEP12821 1306 aa18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 TCP1P17987 556 aaKnown RBP18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 SNX29Q8TEQ0 813 aa18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 PSPC1Q8WXF1 523 aaKnown RBP18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 PKD2L1Q9P0L9 805 aa18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 IPO11Q9UI26 975 aaKnown RBP18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 ZC4H2Q9NQZ6 224 aa18.52■□□□□ 0.55
SMCHD1-201ENST00000320876 PSDA5PKW4 1024 aaPredicted RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 PUM3Q15397 648 aaKnown RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 IWS1Q96ST2 819 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 RIOK1Q9BRS2 568 aaKnown RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 TBC1D7Q9P0N9 293 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 TMTC3Q6ZXV5 915 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 POLKQ9UBT6 870 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 ATF2P15336 505 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 NOP56O00567 594 aaKnown RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 FLT4P35916 1363 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 TXKP42681 527 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 BSPRYQ5W0U4 402 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 KIAA1468Q9P260 1216 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 GPCPD1Q9NPB8 672 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 GADD45BO75293 160 aaPredicted RBP18.51■□□□□ 0.55
SMCHD1-201ENST00000320876 SEC24BO95487 1268 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms