RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 TMC6Q7Z403 805 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TXNRD3Q86VQ6 643 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 GCC1Q96CN9 775 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CCDC114Q96M63 670 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 WDR24Q96S15 920 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TEX13AQ9BXU3 409 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 MINDY4BA8MYZ0 360 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CASQ1P31415 396 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CCZ1BP86790 482 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CCZ1P86791 482 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 RESTQ13127 1097 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 DNAJC21Q5F1R6 531 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 PPP1R18Q6NYC8 613 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PHLDB2Q86SQ0 1253 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CPNE8Q86YQ8 564 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 SLC24A3Q9HC58 644 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 ABCF2Q9UG63 623 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 LAMA2P24043 3122 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 CAVIN2O95810 425 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SSTR3P32745 418 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 TCIRG1Q13488 830 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 ANKLE2Q86XL3 938 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 LEO1Q8WVC0 666 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 NCAPGQ9BPX3 1015 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SOWAHDA6NJG2 315 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 H3BQV1 296 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PNMA6AP0CW24 399 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 MYBL2P10244 700 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PHKG2P15735 406 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 IFFO2Q5TF58 517 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 ZNF790Q6PG37 636 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CEP128Q6ZU80 1094 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 ATG9AQ7Z3C6 839 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SORL1Q92673 2214 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CCDC196A0A1B0GTZ2 297 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 DDX58O95786 925 aaKnown RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 ZNF445P59923 1031 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TRDNQ13061 729 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 TBC1D5Q92609 795 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 RAI14Q9P0K7 980 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 CIZ1Q9ULV3 898 aaPredicted RBP4.08□□□□□ -1.76
GEN1-201ENST00000317402 NCOR2Q9Y618 2525 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 PXDNLA1KZ92 1463 aa4.08□□□□□ -1.76
GEN1-201ENST00000317402 SPATA24Q86W54 205 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 ERC1Q8IUD2 1116 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 CARD6Q9BX69 1037 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PNPLA6Q8IY17 1366 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PTPDC1A2A3K4 754 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 RFX5P48382 616 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 CACNB3P54284 484 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 THADAQ6YHU6 1953 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 KIF3CO14782 793 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 SNW1Q13573 536 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 SART3Q15020 963 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 JRKLQ9Y4A0 524 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 RAD50Q92878 1312 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FRMD3A2A2Y4 597 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 COPB2P35606 906 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FOXO4P98177 505 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PIGBQ92521 554 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DDX27Q96GQ7 796 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 XPO4Q9C0E2 1151 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 FRMD4BQ9Y2L6 1034 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 TELO2Q9Y4R8 837 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DCCP43146 1447 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DYTNA2CJ06 578 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DCAF8L1A6NGE4 600 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 G3V3G9 751 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PHKA1P46020 1223 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PMS1P54277 932 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 E2F4Q16254 413 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 DCAF8Q5TAQ9 597 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 SUSD4Q5VX71 490 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 EPSTI1Q96J88 318 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FGFBP2Q9BYJ0 223 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PRDM11Q9NQV5 511 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 POLE3Q9NRF9 147 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FANCLQ9NW38 375 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 USP20Q9Y2K6 914 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 HYOU1Q9Y4L1 999 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 RGPD1P0DJD0 1748 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 NPHP4O75161 1426 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 RCCD1A6NED2 376 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 NCK2O43639 380 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 RANBP1P43487 201 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 RAD51AP2Q09MP3 1159 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 STIM1Q13586 685 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 JAKMIP3Q5VZ66 844 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 NCAPH2Q6IBW4 605 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 FAM43BQ6ZT52 329 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 ZNF397Q8NF99 534 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 API5Q9BZZ5 524 aaKnown RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 KMT5AQ9NQR1 393 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 PLEKHG1Q9ULL1 1385 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 HGSO14964 777 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 SEMA3FQ13275 785 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 NBPF20Q3BBV1 942 aa4.07□□□□□ -1.76
GEN1-201ENST00000317402 E4F1Q66K89 784 aaPredicted RBP4.07□□□□□ -1.76
GEN1-201ENST00000317402 HOOK3Q86VS8 718 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms