RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CALM3P0DP25 149 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 HSP90AA4PQ58FG1 418 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 EMC10Q5UCC4 262 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 ACRBPQ8NEB7 543 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 MMS19Q96T76 1030 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 PAGR1Q9BTK6 254 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 EDEM3Q9BZQ6 932 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 GOLGA6L10A6NI86 522 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 SYF2O95926 243 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 PAK2Q13177 524 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CCDC181Q5TID7 509 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 EIF1ADQ8N9N8 165 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 NAPBQ9H115 298 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 MAGEF1Q9HAY2 307 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 C21orf2O43822 256 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 IDEP14735 1019 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 GGCXP38435 758 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CCDC84Q86UT8 332 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 AENQ8WTP8 325 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 HYOU1Q9Y4L1 999 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NWD1Q149M9 1564 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 MAP2P11137 1827 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 UBN2Q6ZU65 1347 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CDC27P30260 824 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NF2P35240 595 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NBPF9Q3BBW0 867 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 FKBP15Q5T1M5 1219 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 IFT20Q8IY31 132 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CNPY4Q8N129 248 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 XAGE2Q96GT9 111 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 SUGCTQ9HAC7 445 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 JADE2Q9NQC1 790 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 STIM2Q9P246 746 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NID2Q14112 1375 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 RTL9Q8NET4 1388 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NUTM2BA6NNL0 878 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 LGALS16A8MUM7 142 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 KCNJ18B7U540 433 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 HNRNPH1P31943 449 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 STX17P56962 302 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 KCNJ12Q14500 433 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 SLMAPQ14BN4 828 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 WTAPQ15007 396 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 ARL6IP4Q66PJ3 421 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 PAGE5Q96GU1 130 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 UBAC1Q9BSL1 405 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 KAT14Q9H8E8 782 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 BICDL2A1A5D9 508 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 TNFRSF8P28908 595 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 UBXN1Q04323 297 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 IFFO1Q0D2I5 559 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 WWC2Q6AWC2 1192 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 FOXR1Q6PIV2 292 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 MFSD6Q6ZSS7 791 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 MED15Q96RN5 788 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 GNL3LQ9NVN8 582 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CAPN11Q9UMQ6 739 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 MAP3K12Q12852 859 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 DPYDQ12882 1025 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 AKNAD1Q5T1N1 836 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 RNF10Q8N5U6 811 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 THAP9Q9H5L6 903 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CAPN7Q9Y6W3 813 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 M0R2C6 588 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 TRIM21P19474 475 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 SLC8A1P32418 973 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 SMTNP53814 917 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 IFIT5Q13325 482 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 MEA1Q16626 185 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 CAVIN3Q969G5 261 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 LRRC45Q96CN5 670 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 VEZTQ9HBM0 779 aa5.35□□□□□ -1.55
PTPN13-201ENST00000316707 XRN1Q8IZH2 1706 aaKnown RBP5.35□□□□□ -1.55
PTPN13-201ENST00000316707 PPP1R3GB7ZBB8 358 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ATP5J2-PTCD1G3V325 749 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 PTCD1O75127 700 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 EZRP15311 586 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ERVK-24P63145 666 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 WHAMMQ8TF30 809 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 TEX13AQ9BXU3 409 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 NUCKS1Q9H1E3 243 aaKnown RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 FOXN1O15353 648 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 PPP1R37O75864 691 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CEP85LQ5SZL2 805 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 RUFY4Q6ZNE9 571 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 FMNL3Q8IVF7 1028 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 MREGQ8N565 214 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 GPATCH11Q8N954 259 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 IGDCC4Q8TDY8 1250 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 PHKBQ93100 1093 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CSRNP2Q9H175 543 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 CUEDC2Q9H467 287 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 GJB4Q9NTQ9 266 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 HMGB1P1B2RPK0 211 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 AKR1B10O60218 316 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 AFMP43652 599 aa5.34□□□□□ -1.55
PTPN13-201ENST00000316707 ZNF658Q5TYW1 1059 aaPredicted RBP5.34□□□□□ -1.55
PTPN13-201ENST00000316707 KDM7AQ6ZMT4 941 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms