RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 NUP98P52948 1817 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 TRIM37O94972 964 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 MCM7P33993 719 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 MORC3Q14149 939 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
TFE3-201ENST00000315869 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
TFE3-201ENST00000315869 ANKRD20A12PQ8NF67 263 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 ESR2Q92731 530 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
TFE3-201ENST00000315869 CCDC102AQ96A19 550 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 PLIN2Q99541 437 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 FOXP1Q9H334 677 aaPredicted RBP16.88■□□□□ 0.29
TFE3-201ENST00000315869 TAB2Q9NYJ8 693 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 SRPRBQ9Y5M8 271 aaKnown RBP16.88■□□□□ 0.29
TFE3-201ENST00000315869 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 RAD9BQ6WBX8 426 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 MRFAP1Q9Y605 127 aa16.88■□□□□ 0.29
TFE3-201ENST00000315869 KRT2P35908 639 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 PPARAQ07869 468 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 NOM1Q5C9Z4 860 aaKnown RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 WWC2Q6AWC2 1192 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 CATIPQ7Z7H3 387 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 COL22A1Q8NFW1 1626 aaPredicted RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 TAF1P21675 1872 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 SLF1Q9BQI6 1058 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 TBC1D8O95759 1140 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 NLRP5P59047 1200 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 MDM2Q00987 491 aaPredicted RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 TMTC2Q8N394 836 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 PCMTD1Q96MG8 357 aaPredicted RBP16.87■□□□□ 0.29
TFE3-201ENST00000315869 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
TFE3-201ENST00000315869 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
TFE3-201ENST00000315869 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 VPS18Q9P253 973 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 TCRBV5S4A2TA0A5A2 114 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
TFE3-201ENST00000315869 ZRANB2O95218 330 aaKnown RBP eCLIP16.86■□□□□ 0.29
TFE3-201ENST00000315869 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 EARS2Q5JPH6 523 aaKnown RBP16.86■□□□□ 0.29
TFE3-201ENST00000315869 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 SLC35F6Q8N357 371 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 GUCA1BQ9UMX6 200 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 RFC4P35249 363 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 IQCA1Q86XH1 822 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 PAGE5Q96GU1 130 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 MED15Q96RN5 788 aa16.86■□□□□ 0.29
TFE3-201ENST00000315869 A0A087X0B3 334 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 MYO1BO43795 1136 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 ZNF18P17022 549 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 PTGDRQ13258 359 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
TFE3-201ENST00000315869 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 RABGGTAQ92696 567 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 ADGRG1Q9Y653 693 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 COL4A1P02462 1669 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 MAGEB6P1A0A0J9YX57 407 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 CYP2C19P33261 490 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 TBX2Q13207 712 aaPredicted RBP16.85■□□□□ 0.29
TFE3-201ENST00000315869 NR1I3Q14994 352 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 SUGCTQ9HAC7 445 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 NRAPQ86VF7 1730 aa16.85■□□□□ 0.29
TFE3-201ENST00000315869 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
TFE3-201ENST00000315869 TXLNAP40222 546 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 AK7Q96M32 723 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 KRT9P35527 623 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
TFE3-201ENST00000315869 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 GPIHBP1Q8IV16 184 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 TRIML1Q8N9V2 468 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 PDE11AQ9HCR9 933 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 VGLL3A8MV65 326 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 TNNT3P45378 269 aaPredicted RBP16.84■□□□□ 0.29
TFE3-201ENST00000315869 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
TFE3-201ENST00000315869 CTCFLQ8NI51 663 aaPredicted RBP16.84■□□□□ 0.29
TFE3-201ENST00000315869 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
TFE3-201ENST00000315869 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
TFE3-201ENST00000315869 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.29
TFE3-201ENST00000315869 ALX1Q15699 326 aa16.83■□□□□ 0.29
TFE3-201ENST00000315869 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.29
TFE3-201ENST00000315869 HINFPQ9BQA5 517 aa16.83■□□□□ 0.29
TFE3-201ENST00000315869 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.83■□□□□ 0.29
TFE3-201ENST00000315869 ERLIN1O75477 346 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 GNAT2P19087 354 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 UBXN1Q04323 297 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 SRGAP1Q7Z6B7 1085 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 GDAP1L1Q96MZ0 367 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 CTAGE1Q96RT6 745 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 A0A1B0GTH6 734 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 FAM237AA0A1B0GTK4 181 aa16.83■□□□□ 0.28
TFE3-201ENST00000315869 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms