RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 NACAP1Q9BZK3 213 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 ITIH6Q6UXX5 1313 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 CDC25AP30304 524 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 RCAN1P53805 252 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 LEKR1Q6ZMV7 388 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 STAMQ92783 540 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 TIAM2Q8IVF5 1701 aa15.22■□□□□ 0.03
SKA3-202ENST00000314759 STARD3NLO95772 234 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 VSNL1P62760 191 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 MTA3Q9BTC8 594 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 PHF20Q9BVI0 1012 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 RNF26Q9BY78 433 aaPredicted RBP15.21■□□□□ 0.03
SKA3-202ENST00000314759 CTNND2Q9UQB3 1225 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 PDE8AO60658 829 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 ERLIN1O75477 346 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 PRDM1O75626 825 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 ARHGAP25P42331 645 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 KRT31Q15323 416 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 TMTC1Q8IUR5 882 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.03
SKA3-202ENST00000314759 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 ABHD10Q9NUJ1 306 aa15.21■□□□□ 0.03
SKA3-202ENST00000314759 MROH5Q6ZUA9 1318 aa15.21■□□□□ 0.02
SKA3-202ENST00000314759 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 GNAT2P19087 354 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 NOM1Q5C9Z4 860 aaKnown RBP15.2■□□□□ 0.02
SKA3-202ENST00000314759 MSL3Q8N5Y2 521 aaKnown RBP15.2■□□□□ 0.02
SKA3-202ENST00000314759 PIGBQ92521 554 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 PLEKHA4Q9H4M7 779 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 KRT2P35908 639 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 TUBB4BP68371 445 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 SEC23AQ15436 765 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 ZNF174Q15697 407 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 FERMT2Q96AC1 680 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 CTAGE15A4D2H0 777 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 N4BP3O15049 544 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 CTAGE8P0CG41 777 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 SLC5A1P13866 664 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 AKAP17AQ02040 695 aaKnown RBP15.2■□□□□ 0.02
SKA3-202ENST00000314759 FUT2Q10981 343 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 CTAGE6Q86UF2 777 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 PACS2Q86VP3 889 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 CTAGE4Q8IX94 777 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 BLZF1Q9H2G9 400 aa15.2■□□□□ 0.02
SKA3-202ENST00000314759 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
SKA3-202ENST00000314759 TNKSO95271 1327 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 XDHP47989 1333 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 XBP1P17861 261 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 PPARAQ07869 468 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 WHAMMP3Q1A5X7 153 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 NOA1Q8NC60 698 aaKnown RBP15.19■□□□□ 0.02
SKA3-202ENST00000314759 VPS16Q9H269 839 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 RNF41Q9H4P4 317 aaPredicted RBP15.19■□□□□ 0.02
SKA3-202ENST00000314759 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
SKA3-202ENST00000314759 PIP4K2BP78356 416 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 CASP8Q14790 479 aa15.19■□□□□ 0.02
SKA3-202ENST00000314759 BCL9LQ86UU0 1499 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 EIF3JO75822 258 aaKnown RBP15.18■□□□□ 0.02
SKA3-202ENST00000314759 IRX3P78415 501 aaPredicted RBP15.18■□□□□ 0.02
SKA3-202ENST00000314759 AMPD2Q01433 879 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 CYP26C1Q6V0L0 522 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 NUP88Q99567 741 aaPredicted RBP15.18■□□□□ 0.02
SKA3-202ENST00000314759 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 CARD10Q9BWT7 1032 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 MYH3P11055 1940 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 MYH8P13535 1937 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 BCAMP50895 628 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 LRRC31Q6UY01 552 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 MTRQ99707 1265 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 MYO1AQ9UBC5 1043 aa15.18■□□□□ 0.02
SKA3-202ENST00000314759 COL5A2P05997 1499 aaPredicted RBP15.18■□□□□ 0.02
SKA3-202ENST00000314759 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 PLEKHA8P1O95397 391 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 IVLP07476 585 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 COPB1P53618 953 aaKnown RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 PTGDRQ13258 359 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 PPP2R5BQ15173 497 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 NPY5RQ15761 445 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 E2F4Q16254 413 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 RRAGBQ5VZM2 374 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 NCAPH2Q6IBW4 605 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 SDR42E1Q8WUS8 393 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 TNFRSF25Q93038 417 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 EIF3CQ99613 913 aaKnown RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 MYO6Q9UM54 1294 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 LRRIQ3A6PVS8 624 aaPredicted RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 BMP15O95972 392 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 KRT9P35527 623 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 ENAHQ8N8S7 591 aaPredicted RBP15.17■□□□□ 0.02
SKA3-202ENST00000314759 CHP1Q99653 195 aa15.17■□□□□ 0.02
SKA3-202ENST00000314759 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms