RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 TRIM27P14373 513 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 CST5P28325 142 aaPredicted RBP4.95□□□□□ -1.62
POLR2B-201ENST00000314595 CHD1LQ86WJ1 897 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 ABRAQ8N0Z2 381 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 TEKT1Q969V4 418 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 RUNDC1Q96C34 613 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 NUDT12Q9BQG2 462 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 GREM2Q9H772 168 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 CGNQ9P2M7 1197 aaKnown RBP4.95□□□□□ -1.62
POLR2B-201ENST00000314595 TRIM35Q9UPQ4 493 aa4.95□□□□□ -1.62
POLR2B-201ENST00000314595 MYH2Q9UKX2 1941 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 APAF1O14727 1248 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TPM3P06753 285 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 ZKSCAN1P17029 563 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 KLRK1P26718 216 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PTPN5P54829 565 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 SWT1Q5T5J6 900 aaKnown RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PSRC1Q6PGN9 363 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PRKAG2Q9UGJ0 569 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 CCDC171Q6TFL3 1326 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PTPRSQ13332 1948 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 RANBP2P49792 3224 aaKnown RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 CLRN2A0PK11 232 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TRIM43BA6NCK2 446 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 KDM4AO75164 1064 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 DDX58O95786 925 aaKnown RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 KCNJ6P48051 423 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 MDM2Q00987 491 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 GRB14Q14449 540 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 ZNF428Q96B54 188 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TRIM43Q96BQ3 446 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TIGD1Q96MW7 591 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 EPHX3Q9H6B9 360 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 SCAF8Q9UPN6 1271 aaKnown RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PCDHA11Q9Y5I1 949 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PCDHAC2Q9Y5I4 1007 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TACC3Q9Y6A5 838 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 MROH7Q68CQ1 1323 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 IGKV5-2P06315 115 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 FPGSQ05932 587 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 PPIGQ13427 754 aaKnown RBP eCLIP4.94□□□□□ -1.626e-7■□□□□ 10.6
POLR2B-201ENST00000314595 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 KMT5BQ4FZB7 885 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 CDAN1Q8IWY9 1227 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 SHCBP1Q8NEM2 672 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 ZKSCAN4Q969J2 545 aaPredicted RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TDRD3Q9H7E2 651 aaKnown RBP4.94□□□□□ -1.62
POLR2B-201ENST00000314595 VEZTQ9HBM0 779 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 BRMS1Q9HCU9 246 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TMOD2Q9NZR1 351 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 TBX21Q9UL17 535 aa4.94□□□□□ -1.62
POLR2B-201ENST00000314595 ADGRE1Q14246 886 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 KSR2Q6VAB6 950 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 SUGP1Q8IWZ8 645 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 ALG13Q9NP73 1137 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 PYCARDQ9ULZ3 195 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 DDX19BQ9UMR2 479 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 PRUNE2Q8WUY3 3088 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 MROH5Q6ZUA9 1318 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 NEURL1BA8MQ27 555 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 SEMA3EO15041 775 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 TIMP1P01033 207 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CLTBP09497 229 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 BRD2P25440 801 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 MAP2K5Q13163 448 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 GCKRQ14397 625 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 C11orf91Q3C1V1 193 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 HDGFL1Q5TGJ6 251 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 POTEEQ6S8J3 1075 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 TSC1Q92574 1164 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 RNPC3Q96LT9 517 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 ATP8B1O43520 1251 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 PFKMP08237 780 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CYP2C8P10632 490 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CC2D1BQ5T0F9 858 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 MFSD5Q6N075 450 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CEP120Q8N960 986 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 BADQ92934 168 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 MIS18AQ9NYP9 233 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CALCOCO1Q9P1Z2 691 aa4.93□□□□□ -1.62
POLR2B-201ENST00000314595 TTF2Q9UNY4 1162 aaKnown RBP4.93□□□□□ -1.62
POLR2B-201ENST00000314595 CEP290O15078 2479 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 A0A1B0GUL7 405 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 C19orf81C9J6K1 198 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 ITGA6P23229 1130 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 INPP5BP32019 993 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 CDK7P50613 346 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 MFSD14BQ5SR56 506 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 AXDND1Q5T1B0 1012 aaPredicted RBP4.92□□□□□ -1.62
POLR2B-201ENST00000314595 MFSD14CQ5VZR4 134 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 CAVIN1Q6NZI2 390 aaKnown RBP4.92□□□□□ -1.62
POLR2B-201ENST00000314595 ATF7IPQ6VMQ6 1270 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 SLC43A3Q8NBI5 491 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 KCNB2Q92953 911 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 TANGO6Q9C0B7 1094 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 TSPY26PQ9H489 355 aa4.92□□□□□ -1.62
POLR2B-201ENST00000314595 PAXBP1Q9Y5B6 917 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms