RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 GOLGA6AQ9NYA3 693 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 ERICH2A1L162 156 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 MBD4O95243 580 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
COL6A2-202ENST00000310645 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
COL6A2-202ENST00000310645 KCNJ18B7U540 433 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 PRKAB2O43741 272 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 DEXIO95424 95 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 KCNJ12Q14500 433 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
COL6A2-202ENST00000310645 MYO1AQ9UBC5 1043 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 A0A087WUV0 522 aaPredicted RBP16.53■□□□□ 0.24
COL6A2-202ENST00000310645 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 EXOC5O00471 708 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 WNT7AO00755 349 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 TDO2P48775 406 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 IFNL3Q8IZI9 196 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
COL6A2-202ENST00000310645 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 EBAG9O00559 213 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 ERLIN2O94905 339 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
COL6A2-202ENST00000310645 LIFRP42702 1097 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 PHKA1P46020 1223 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 C2orf54Q08AI8 447 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 TTF1Q15361 905 aaPredicted RBP16.52■□□□□ 0.24
COL6A2-202ENST00000310645 GPIHBP1Q8IV16 184 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 BCAS4Q8TDM0 211 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 NELFBQ8WX92 580 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 JAKMIP2Q96AA8 810 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 GSDMAQ96QA5 445 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
COL6A2-202ENST00000310645 POLD4Q9HCU8 107 aa16.52■□□□□ 0.24
COL6A2-202ENST00000310645 GOLGA6BA6NDN3 693 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 GPTP24298 496 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 MNAT1P51948 309 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 FBXW10Q5XX13 1052 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 VIPAS39Q9H9C1 493 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.23
COL6A2-202ENST00000310645 STK36Q9NRP7 1315 aa16.52■□□□□ 0.23
COL6A2-202ENST00000310645 AATFQ9NY61 560 aaKnown RBP eCLIP16.52■□□□□ 0.23
COL6A2-202ENST00000310645 LUC7L2Q9Y383 392 aaKnown RBP16.52■□□□□ 0.23
COL6A2-202ENST00000310645 AARSP49588 968 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL6A2-202ENST00000310645 SND1Q7KZF4 910 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL6A2-202ENST00000310645 BRMS1Q9HCU9 246 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 IRAK1P51617 712 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 PAK1Q13153 545 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 TCP11X2Q5H9J9 407 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 AKNAD1Q5T1N1 836 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 OR8K1Q8NGG5 319 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 PSMB7Q99436 277 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 DUSP10Q9Y6W6 482 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
COL6A2-202ENST00000310645 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
COL6A2-202ENST00000310645 SNAP23O00161 211 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 MCM3P25205 808 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 GNGT1P63211 74 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 CYP27A1Q02318 531 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 PDE2AO00408 941 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 PPARAQ07869 468 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 KAT2BQ92831 832 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 LIMA1Q9UHB6 759 aaKnown RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 BAZ2BQ9UIF8 2168 aaKnown RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 AGPSO00116 658 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 IDEP14735 1019 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 PPARDQ03181 441 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 LACRTQ9GZZ8 138 aa16.5■□□□□ 0.23
COL6A2-202ENST00000310645 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-202ENST00000310645 MAP3K15Q6ZN16 1313 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 HERVK_113P62684 666 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 UBE3CQ15386 1083 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 UBAC1Q9BSL1 405 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 CAPS2Q9BXY5 557 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
COL6A2-202ENST00000310645 SEMA3EO15041 775 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 IPO7O95373 1038 aaKnown RBP16.49■□□□□ 0.23
COL6A2-202ENST00000310645 ITGA6P23229 1130 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 SLC7A5Q01650 507 aa16.49■□□□□ 0.23
COL6A2-202ENST00000310645 PTGDRQ13258 359 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms