RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PDCLQ13371 301 aa20.3■□□□□ 0.84
SPSB4-201ENST00000310546 NEDD9Q14511 834 aa20.3■□□□□ 0.84
SPSB4-201ENST00000310546 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
SPSB4-201ENST00000310546 N4BP2L2Q92802 583 aaPredicted RBP20.3■□□□□ 0.84
SPSB4-201ENST00000310546 COPRSQ9NQ92 184 aa20.3■□□□□ 0.84
SPSB4-201ENST00000310546 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.3■□□□□ 0.84
SPSB4-201ENST00000310546 TBC1D2BQ9UPU7 963 aa20.3■□□□□ 0.84
SPSB4-201ENST00000310546 RNF225M0QZC1 329 aaPredicted RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 CCNI2Q6ZMN8 369 aaPredicted RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 RALYLQ86SE5 291 aaKnown RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 ZKSCAN4Q969J2 545 aaPredicted RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 ABHD10Q9NUJ1 306 aa20.29■□□□□ 0.84
SPSB4-201ENST00000310546 ECM2O94769 699 aaPredicted RBP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 CYP26C1Q6V0L0 522 aa20.29■□□□□ 0.84
SPSB4-201ENST00000310546 SND1Q7KZF4 910 aaKnown RBP eCLIP20.29■□□□□ 0.84
SPSB4-201ENST00000310546 PALLDQ8WX93 1383 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 CCDC189A1A4V9 331 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 M0R2C6 588 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 SARSP49591 514 aaKnown RBP20.28■□□□□ 0.84
SPSB4-201ENST00000310546 IMMTQ16891 758 aaKnown RBP20.28■□□□□ 0.84
SPSB4-201ENST00000310546 ELF1P32519 619 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 NF2P35240 595 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 PBX1P40424 430 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 FNTAP49354 379 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 TIMM10P62072 90 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 B4GALNT4Q76KP1 1039 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 RRP36Q96EU6 259 aaKnown RBP20.28■□□□□ 0.84
SPSB4-201ENST00000310546 CHP1Q99653 195 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 SYNRGQ9UMZ2 1314 aa20.28■□□□□ 0.84
SPSB4-201ENST00000310546 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 UBE2Q2LH0YL09 131 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 ERCC5P28715 1186 aaPredicted RBP20.27■□□□□ 0.84
SPSB4-201ENST00000310546 CASP1P29466 404 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 ATP1A2P50993 1020 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 TRIM29Q14134 588 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 FKBP15Q5T1M5 1219 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 RNF187Q5TA31 235 aaPredicted RBP20.27■□□□□ 0.84
SPSB4-201ENST00000310546 NT5DC1Q5TFE4 455 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 SPATA1Q5VX52 437 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
SPSB4-201ENST00000310546 ZMYM6O95789 1325 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 ZNF185O15231 689 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 MEFVO15553 781 aaPredicted RBP20.27■□□□□ 0.84
SPSB4-201ENST00000310546 AFMP43652 599 aa20.27■□□□□ 0.84
SPSB4-201ENST00000310546 TARSL2A2RTX5 802 aaKnown RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 N4BP3O15049 544 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 CHUKO15111 745 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 ANTXR2P58335 489 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 MRPS25P82663 173 aaKnown RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 CTAGE1Q96RT6 745 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 SRCAPQ6ZRS2 3230 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 UBR2Q8IWV8 1755 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 AFDNP55196 1824 aaKnown RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 NRAPQ86VF7 1730 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 ARFGEF2Q9Y6D5 1785 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 CD44P16070 742 aaKnown RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 KRT9P35527 623 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 DDR1Q08345 913 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 FBXL16Q8N461 479 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 JAKMIP2Q96AA8 810 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 VPS16Q9H269 839 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 METAP2P50579 478 aaKnown RBP eCLIP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 ACTN3Q08043 901 aaPredicted RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 KCTD16Q68DU8 428 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 USP49Q70CQ1 688 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 MICU3Q86XE3 530 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 OSBP2Q969R2 916 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 MIEF2Q96C03 454 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
SPSB4-201ENST00000310546 ZNF594Q96JF6 807 aaPredicted RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 A1CFQ9NQ94 594 aaKnown RBP20.26■□□□□ 0.83
SPSB4-201ENST00000310546 SLIT2O94813 1529 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 KCPQ6ZWJ8 1503 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 C2orf54Q08AI8 447 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 TRIML1Q8N9V2 468 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 SH3GL2Q99962 352 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 ODF2LQ9ULJ1 636 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 EPN1Q9Y6I3 576 aaPredicted RBP20.25■□□□□ 0.83
SPSB4-201ENST00000310546 RNF113AO15541 343 aaKnown RBP20.25■□□□□ 0.83
SPSB4-201ENST00000310546 FGAP02671 866 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 HLFQ16534 295 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 NCOA7Q8NI08 942 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 ARL8AQ96BM9 186 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 RUFY1Q96T51 708 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 VEZTQ9HBM0 779 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 FAM184BQ9ULE4 1060 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 MYH8P13535 1937 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 TOGARAM1Q9Y4F4 1720 aa20.25■□□□□ 0.83
SPSB4-201ENST00000310546 FSBPO95073 299 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 NDUFA10O95299 355 aa20.24■□□□□ 0.83
SPSB4-201ENST00000310546 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
SPSB4-201ENST00000310546 DHX37Q8IY37 1157 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms