RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 NR1I3Q14994 352 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 APTXQ7Z2E3 356 aaKnown RBP17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 NYXQ9GZU5 481 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 ANKRD2Q9GZV1 360 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 OGFRQ9NZT2 677 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 NARFQ9UHQ1 456 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 DNAI1Q9UI46 699 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 PPP2R2CQ9Y2T4 447 aa17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.37
SPIRE1-201ENST00000309836 A0A1B0GTH6 734 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 SCG2P13521 617 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 ZSCAN20P17040 1043 aaPredicted RBP17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 RCSD1Q6JBY9 416 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 FBXO38Q6PIJ6 1188 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 TXNRD3Q86VQ6 643 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 BAG1Q99933 345 aaPredicted RBP17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
SPIRE1-201ENST00000309836 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 PTGDRQ13258 359 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 CT47A1Q5JQC4 288 aaPredicted RBP17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 SPATA1Q5VX52 437 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 ARPP21Q9UBL0 812 aaPredicted RBP17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 SBF2Q86WG5 1849 aa17.32■□□□□ 0.36
SPIRE1-201ENST00000309836 XDHP47989 1333 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 TM4SF1P30408 202 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 E2F4Q16254 413 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 IL17AQ16552 155 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 TOGARAM2Q6ZUX3 1019 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 SLC51AQ86UW1 340 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 USP17L8P0C7I0 530 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 STX17P56962 302 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
SPIRE1-201ENST00000309836 TEX33O43247 280 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 STX10O60499 249 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 NLRP5P59047 1200 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 CCDC34Q96HJ3 373 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 GSDMAQ96QA5 445 aa17.3■□□□□ 0.36
SPIRE1-201ENST00000309836 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 DMTNQ08495 405 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 PDXDC2PQ6P474 469 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 AMIGO3Q86WK7 504 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 STAMQ92783 540 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 TSPY2A6NKD2 308 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 PBX1P40424 430 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 PRDM4Q9UKN5 801 aa17.29■□□□□ 0.36
SPIRE1-201ENST00000309836 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 BTAF1O14981 1849 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 ZBTB22O15209 634 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 GNPATO15228 680 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 NPHP1O15259 732 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 H2AFXP16104 143 aaPredicted RBP17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 MCM7P33993 719 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 DZIP1Q86YF9 867 aaKnown RBP17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 DYNLL2Q96FJ2 89 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 MTRQ99707 1265 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 ADD3Q9UEY8 706 aaKnown RBP17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
SPIRE1-201ENST00000309836 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 C12orf60Q5U649 245 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 TMED8Q6PL24 325 aaPredicted RBP17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 ZNF446Q9NWS9 450 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
SPIRE1-201ENST00000309836 AKR1B15C9JRZ8 316 aaPredicted RBP17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 ZPR1O75312 459 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 TFAP4Q01664 338 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 IQUBQ8NA54 791 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 ANKS1AQ92625 1134 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 GPKOWQ92917 476 aaPredicted RBP eCLIP17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 WDR24Q96S15 920 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 DESI2Q9BSY9 194 aa17.27■□□□□ 0.35
SPIRE1-201ENST00000309836 KAT14Q9H8E8 782 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms